RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MSL2Q9HCI7 577 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 NLRC4Q9NPP4 1024 aa6.43□□□□□ -1.38
UPF3A-207ENST00000481131 TBKBP1A7MCY6 615 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 B5MCH6 92 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 RASA4BC9J798 803 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 F8W8V4 182 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 RASA4O43374 803 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 LAMTOR5O43504 91 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 SNRPA1P09661 255 aaKnown RBP6.42□□□□□ -1.38
UPF3A-207ENST00000481131 MTHFD1P11586 935 aaKnown RBP6.42□□□□□ -1.38
UPF3A-207ENST00000481131 EN2P19622 333 aaPredicted RBP6.42□□□□□ -1.38
UPF3A-207ENST00000481131 SUMO3P55854 103 aaPredicted RBP6.42□□□□□ -1.38
UPF3A-207ENST00000481131 CLRN1P58418 232 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 ZNF543Q08ER8 600 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 IFIT5Q13325 482 aaKnown RBP6.42□□□□□ -1.38
UPF3A-207ENST00000481131 CNGA2Q16280 664 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 DOK3Q7L591 496 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 FEZF2Q8TBJ5 459 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 TNIP3Q96KP6 325 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 CCDC138Q96M89 665 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 POLR3GLQ9BT43 218 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 PACSIN1Q9BY11 444 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 EPC1Q9H2F5 836 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 KIAA1586Q9HCI6 787 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 SLAMF7Q9NQ25 335 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 PIH1D1Q9NWS0 290 aaKnown RBP6.42□□□□□ -1.38
UPF3A-207ENST00000481131 RAPGEFL1Q9UHV5 662 aa6.42□□□□□ -1.38
UPF3A-207ENST00000481131 ISM1B1AKI9 464 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 BRAFP15056 766 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 BMP7P18075 431 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 SLC6A2P23975 617 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 KIF22Q14807 665 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 GRM7Q14831 915 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 SLFN13Q68D06 897 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 ZNF365Q70YC5 407 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 CERS3Q8IU89 383 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 RNF169Q8NCN4 708 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 KBTBD7Q8WVZ9 684 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 MAML1Q92585 1016 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 RIPOR3Q96MK2 946 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 OR14A2Q96R54 314 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 DPH1Q9BZG8 443 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 ZNF287Q9HBT7 754 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 CNNM1Q9NRU3 951 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 GNL3LQ9NVN8 582 aaKnown RBP6.41□□□□□ -1.38
UPF3A-207ENST00000481131 FAM30AQ9NZY2 134 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 JKAMPQ9P055 326 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 PPP4R1LQ9P1A2 415 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 ZDHHC8Q9ULC8 765 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 DMTF1Q9Y222 760 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 MED16Q9Y2X0 877 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 SH3BP1Q9Y3L3 701 aa6.41□□□□□ -1.38
UPF3A-207ENST00000481131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.41□□□□□ -1.38
UPF3A-207ENST00000481131 THOC2Q8NI27 1593 aaKnown RBP6.4□□□□□ -1.38
UPF3A-207ENST00000481131 NCK2O43639 380 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 AMHP03971 560 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 GJB1P08034 283 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 HOXA5P20719 270 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 CNR2P34972 360 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
UPF3A-207ENST00000481131 FOXL1Q12952 345 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 UBXN2BQ14CS0 331 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 SURF1Q15526 300 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 ATP2B3Q16720 1220 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 SMC5Q8IY18 1101 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 ELOA2Q8IYF1 753 aaPredicted RBP6.4□□□□□ -1.38
UPF3A-207ENST00000481131 OR2C3Q8N628 320 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 OR52N2Q8NGI0 321 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 KCNC2Q96PR1 638 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 GSTO2Q9H4Y5 243 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 BRD9Q9H8M2 597 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 SMURF2Q9HAU4 748 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.4□□□□□ -1.38
UPF3A-207ENST00000481131 PLA2G3Q9NZ20 509 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 COL20A1Q9P218 1284 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 OGDHLQ9ULD0 1010 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 SNX13Q9Y5W8 968 aa6.4□□□□□ -1.38
UPF3A-207ENST00000481131 A0A0G2JLL6 359 aaPredicted RBP6.39□□□□□ -1.39
UPF3A-207ENST00000481131 FOXS1O43638 330 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 EIF3JO75822 258 aaKnown RBP6.39□□□□□ -1.39
UPF3A-207ENST00000481131 HAUS5O94927 633 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 PRSS23O95084 383 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 POMCP01189 267 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 GNAI3P08754 354 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 TSHRP16473 764 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 RPL17P18621 184 aaKnown RBP6.39□□□□□ -1.39
UPF3A-207ENST00000481131 TNFSF4P23510 183 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 GNAI1P63096 354 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 NOMO3P69849 1222 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 TBC1D10BQ4KMP7 808 aaPredicted RBP6.39□□□□□ -1.39
UPF3A-207ENST00000481131 C3orf38Q5JPI3 329 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 ATXN7L2Q5T6C5 722 aaPredicted RBP6.39□□□□□ -1.39
UPF3A-207ENST00000481131 GORABQ5T7V8 394 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 TCTN3Q6NUS6 607 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 APBB1IPQ7Z5R6 666 aaPredicted RBP6.39□□□□□ -1.39
UPF3A-207ENST00000481131 DPP9Q86TI2 863 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 FAM83AQ86UY5 434 aa6.39□□□□□ -1.39
UPF3A-207ENST00000481131 FUKQ8N0W3 1084 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms