RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 LPOP22079 712 aaPredicted RBP6.69□□□□□ -1.34
CALD1-219ENST00000480638 FGFR4P22455 802 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 SMARCA1P28370 1054 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 GDF5P43026 501 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 UTP14CQ5TAP6 766 aaKnown RBP6.69□□□□□ -1.34
CALD1-219ENST00000480638 B3GNTL1Q67FW5 361 aaPredicted RBP6.69□□□□□ -1.34
CALD1-219ENST00000480638 B3GNT9Q6UX72 402 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 USP51Q70EK9 711 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 EPM2AIP1Q7L775 607 aaPredicted RBP6.69□□□□□ -1.34
CALD1-219ENST00000480638 HEATR3Q7Z4Q2 680 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 PROKR1Q8TCW9 393 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 MARS2Q96GW9 593 aaKnown RBP6.69□□□□□ -1.34
CALD1-219ENST00000480638 LRGUKQ96M69 825 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 MLST8Q9BVC4 326 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 SIDT1Q9NXL6 827 aaKnown RBP6.69□□□□□ -1.34
CALD1-219ENST00000480638 ABCF2Q9UG63 623 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 USP25Q9UHP3 1055 aa6.69□□□□□ -1.34
CALD1-219ENST00000480638 CENPVL1A0A0U1RR11 272 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 AGFG2O95081 481 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 FSHBP01225 129 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 HLA-DOAP06340 250 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 FTH1P19P0C7X4 201 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 PRDX5P30044 214 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 BMPR1AP36894 532 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 HSD11B2P80365 405 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 GTF2H3Q13889 308 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 CCDC93Q567U6 631 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 KCNV1Q6PIU1 500 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 CHPFQ8IZ52 775 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 C1GALT1C1Q96EU7 318 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 PNKPQ96T60 521 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 ADAM2Q99965 735 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 TLR10Q9BXR5 811 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 ANLNQ9NQW6 1124 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 LMBRD1Q9NUN5 540 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 KLHL42Q9P2K6 505 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 FEZ2Q9UHY8 353 aaPredicted RBP6.68□□□□□ -1.34
CALD1-219ENST00000480638 NOB1Q9ULX3 412 aaKnown RBP6.68□□□□□ -1.34
CALD1-219ENST00000480638 SLC45A2Q9UMX9 530 aa6.68□□□□□ -1.34
CALD1-219ENST00000480638 PRPF3O43395 683 aaKnown RBP6.67□□□□□ -1.34
CALD1-219ENST00000480638 GPANK1O95872 356 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 ALDH2P05091 517 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 TYRP14679 529 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 DDX6P26196 483 aaKnown RBP eCLIP6.67□□□□□ -1.34
CALD1-219ENST00000480638 LY6G5CQ5SRR4 150 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 FAM102BQ5T8I3 360 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 CXorf57Q6NSI4 855 aaKnown RBP6.67□□□□□ -1.34
CALD1-219ENST00000480638 TMEM132CQ8N3T6 1108 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 SLC16A11Q8NCK7 471 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 TMIEQ8NEW7 156 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 NEU4Q8WWR8 484 aaPredicted RBP6.67□□□□□ -1.34
CALD1-219ENST00000480638 LARP4BQ92615 738 aaKnown RBP6.67□□□□□ -1.34
CALD1-219ENST00000480638 FAM167AQ96KS9 214 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 KLHL32Q96NJ5 620 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 TAAR9Q96RI9 348 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 WDCPQ9H6R7 721 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 GNL3LQ9NVN8 582 aaKnown RBP6.67□□□□□ -1.34
CALD1-219ENST00000480638 HSFX1Q9UBD0 423 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 TCEAL9Q9UHQ7 104 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 KCNE5Q9UJ90 142 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 STXBP5LQ9Y2K9 1186 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 NR2E3Q9Y5X4 410 aa6.67□□□□□ -1.34
CALD1-219ENST00000480638 UNC119BA6NIH7 251 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 CYR61O00622 381 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 GNAI3P08754 354 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 IL12RB1P42701 662 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 PIK3CGP48736 1102 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 GNAI1P63096 354 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 NKX6-1P78426 367 aaPredicted RBP6.66□□□□□ -1.34
CALD1-219ENST00000480638 MXRA7P84157 204 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 KLF10Q13118 480 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 RESTQ13127 1097 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 NXNQ6DKJ4 435 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 ARMC6Q6NXE6 501 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 ARHGEF19Q8IW93 802 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 TCEAL8Q8IYN2 117 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 CAMKK1Q8N5S9 505 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 SLC35G2Q8TBE7 412 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 CGRRF1Q99675 332 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 TMPRSS5Q9H3S3 457 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 RLIMQ9NVW2 624 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 RNF181Q9P0P0 153 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 CDYLQ9Y232 598 aa6.66□□□□□ -1.34
CALD1-219ENST00000480638 TSPAN6O43657 245 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 CDKL5O76039 1030 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 SPDEFO95238 335 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 U2AF1L5P0DN76 240 aaPredicted RBP6.65□□□□□ -1.34
CALD1-219ENST00000480638 CXADRP78310 365 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 U2AF1Q01081 240 aaKnown RBP eCLIP6.65□□□□□ -1.34
CALD1-219ENST00000480638 CCDC157Q569K6 752 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 FOXR2Q6PJQ5 311 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 DENND1CQ8IV53 801 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 AOPEPQ8N6M6 819 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 RNF31Q96EP0 1072 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 ACO2Q99798 780 aaKnown RBP6.65□□□□□ -1.34
CALD1-219ENST00000480638 ALOXE3Q9BYJ1 711 aa6.65□□□□□ -1.34
CALD1-219ENST00000480638 MRPL46Q9H2W6 279 aaKnown RBP6.65□□□□□ -1.34
CALD1-219ENST00000480638 BRD9Q9H8M2 597 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms