RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 C2orf71A6NGG8 1288 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 LRRIQ3A6PVS8 624 aaPredicted RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 CXCL14O95715 111 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 TNNC2P02585 160 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 TNNI1P19237 187 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 LRRC63Q05C16 580 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 ELAVL2Q12926 359 aaKnown RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 USP41Q3LFD5 358 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 SCARA3Q6AZY7 606 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 PDE12Q6L8Q7 609 aaKnown RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 KIAA1841Q6NSI8 718 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 PRSS55Q6UWB4 352 aaPredicted RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 RIN2Q8WYP3 895 aaPredicted RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 PPP2R3CQ969Q6 453 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 IGFLR1Q9H665 355 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 MRPL17Q9NRX2 175 aaKnown RBP16.36■□□□□ 0.21
ABCF3-213ENST00000480539 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 REV3LO60673 3130 aa16.36■□□□□ 0.21
ABCF3-213ENST00000480539 VWA8A3KMH1 1905 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 PER2O15055 1255 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 CETN3O15182 167 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 SPTLC1O15269 473 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TRAPPC3O43617 180 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 KRT19P08727 400 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TRIM49P0CI25 452 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TRIM49CP0CI26 452 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 EPB41P11171 864 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 DLG4P78352 724 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 DSG1Q02413 1049 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TTI2Q6NXR4 508 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 CAVIN1Q6NZI2 390 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 GLYCTKQ8IVS8 523 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 CACTINQ8WUQ7 758 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 SUSD3Q96L08 255 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 DUSP9Q99956 384 aaKnown RBP16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TTPALQ9BTX7 342 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TLE6Q9H808 572 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 CHST7Q9NS84 486 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 SIX4Q9UIU6 781 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 AGAP1Q9UPQ3 857 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 TSC2P49815 1807 aa16.35■□□□□ 0.21
ABCF3-213ENST00000480539 BICDL2A1A5D9 508 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 PIRO00625 290 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 SLC16A3O15427 465 aaKnown RBP16.34■□□□□ 0.21
ABCF3-213ENST00000480539 LINC01565O15544 149 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 RPL17P18621 184 aaKnown RBP16.34■□□□□ 0.21
ABCF3-213ENST00000480539 TAF6P49848 677 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 NLRP12P59046 1061 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 RBM10P98175 930 aaKnown RBP16.34■□□□□ 0.21
ABCF3-213ENST00000480539 BFSP1Q12934 665 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 PSMD5Q16401 504 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 DUSP6Q16828 381 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 DUOXA2Q1HG44 320 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 KIAA0319Q5VV43 1072 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 LLGL2Q6P1M3 1020 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
ABCF3-213ENST00000480539 EP400NLQ6ZTU2 488 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 CSGALNACT2Q8N6G5 542 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 MRPL43Q8N983 215 aaKnown RBP16.34■□□□□ 0.21
ABCF3-213ENST00000480539 ZNF560Q96MR9 790 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 PRDM6Q9NQX0 595 aa16.34■□□□□ 0.21
ABCF3-213ENST00000480539 MAPK13O15264 365 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 KRT13P13646 458 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 FGFR3P22607 806 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 AARSP49588 968 aaKnown RBP eCLIP16.33■□□□□ 0.2
ABCF3-213ENST00000480539 VAMP7P51809 220 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 LILRA4P59901 499 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 FKBP3Q00688 224 aaKnown RBP16.33■□□□□ 0.2
ABCF3-213ENST00000480539 SV2CQ496J9 727 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 DSTYKQ6XUX3 929 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
ABCF3-213ENST00000480539 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 CXorf38Q8TB03 319 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 PIK3R5Q8WYR1 880 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 ZNF516Q92618 1163 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 MKNK1Q9BUB5 465 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 CLDND1Q9NY35 253 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 PCDHB8Q9UN66 801 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 TIMM13Q9Y5L4 95 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-213ENST00000480539 IRAK3Q9Y616 596 aa16.33■□□□□ 0.2
ABCF3-213ENST00000480539 SPTBN5Q9NRC6 3674 aaKnown RBP16.33■□□□□ 0.2
ABCF3-213ENST00000480539 TEX28O15482 410 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 LILRB3O75022 631 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 CLASP2O75122 1294 aaKnown RBP16.32■□□□□ 0.2
ABCF3-213ENST00000480539 CLSTN1O94985 981 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 GLP2RO95838 553 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 CNPP09543 421 aaKnown RBP16.32■□□□□ 0.2
ABCF3-213ENST00000480539 ODC1P11926 461 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 BIRC3Q13489 604 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 C1orf220Q5T0J3 134 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms