RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 TNNI1P19237 187 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 EEF1GP26641 437 aaKnown RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 LRPAP1P30533 357 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 GRIK3Q13003 919 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 TUSC3Q13454 348 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 KCNJ12Q14500 433 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 TMEM132DQ14C87 1099 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 CCDC40Q4G0X9 1142 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 MIIPQ5JXC2 388 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 LMBRD2Q68DH5 695 aaPredicted RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 TRAPPC11Q7Z392 1133 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 TMEM130Q8N3G9 435 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 CLP1Q92989 425 aaKnown RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 C18orf25Q96B23 403 aaPredicted RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 CCDC127Q96BQ5 260 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 RPS6KC1Q96S38 1066 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 MRPL9Q9BYD2 267 aaKnown RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 SLC38A7Q9NVC3 462 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 SIX4Q9UIU6 781 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 INPP5FQ9Y2H2 1132 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 COQ4Q9Y3A0 265 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
CD46-214ENST00000480003 TRIP11Q15643 1979 aa10.37□□□□□ -0.75
CD46-214ENST00000480003 TRIOBPQ9H2D6 2365 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 P4HA2O15460 535 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 XPOTO43592 962 aaKnown RBP10.36□□□□□ -0.75
CD46-214ENST00000480003 TLL1O43897 1013 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 ATP1A3P13637 1013 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 CDK11BP21127 795 aaKnown RBP10.36□□□□□ -0.75
CD46-214ENST00000480003 IGFBP6P24592 240 aaPredicted RBP10.36□□□□□ -0.75
CD46-214ENST00000480003 RPL9P32969 192 aaKnown RBP10.36□□□□□ -0.75
CD46-214ENST00000480003 GUCY2FP51841 1108 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 RABGGTBP53611 331 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 KRT31Q15323 416 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 MAN2A1Q16706 1144 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 UPP1Q16831 310 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 ZACNQ401N2 412 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 HSP90AA4PQ58FG1 418 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 GLRA4Q5JXX5 417 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 USP37Q86T82 979 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 ABI1Q8IZP0 508 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 BEST2Q8NFU1 509 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 LMO3Q8TAP4 145 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 URGCPQ8TCY9 931 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 ANKRD36BP1Q96IX9 119 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 TMEM175Q9BSA9 504 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 TUBGCP2Q9BSJ2 902 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 IL21Q9HBE4 155 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 DPP3Q9NY33 737 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 PCDHA11Q9Y5I1 949 aa10.36□□□□□ -0.75
CD46-214ENST00000480003 COL4A6Q14031 1691 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 CITO14578 2027 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 NRP1O14786 923 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 GPR37O15354 613 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 STX10O60499 249 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 ARHGEF15O94989 841 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 VNN1O95497 513 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 EFEMP2O95967 443 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 MYOGP15173 224 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 MTIF2P46199 727 aaKnown RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 GCLMP48507 274 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 FMO5P49326 533 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 TFAMQ00059 246 aaKnown RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 PAN2Q504Q3 1202 aaKnown RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 TDRD10Q5VZ19 366 aaKnown RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 C9orf57Q5W0N0 161 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 KRT39Q6A163 491 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 DPY19L2P1Q6NXN4 242 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 DCLRE1AQ6PJP8 1040 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 CREBRFQ8IUR6 639 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 LRRC43Q8N309 656 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 FIBCD1Q8N539 461 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 UROC1Q96N76 676 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 FAM193BQ96PV7 902 aaPredicted RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 YME1L1Q96TA2 773 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 PAAF1Q9BRP4 392 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 PBX4Q9BYU1 374 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 NDST4Q9H3R1 872 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 GOLGA2P5Q9HBQ8 144 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 TMEM8AQ9HCN3 771 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 MAGEC2Q9UBF1 373 aaPredicted RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 DNAJB4Q9UDY4 337 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 TUBGCP4Q9UGJ1 667 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 FAN1Q9Y2M0 1017 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 YBX2Q9Y2T7 364 aaKnown RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD46-214ENST00000480003 MRPL42Q9Y6G3 142 aaKnown RBP10.35□□□□□ -0.75
CD46-214ENST00000480003 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
CD46-214ENST00000480003 FNDC1Q4ZHG4 1894 aaPredicted RBP10.34□□□□□ -0.75
CD46-214ENST00000480003 LCHNA4D1U4 455 aa10.34□□□□□ -0.75
CD46-214ENST00000480003 LINC01553A4QN01 128 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms