RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 MEF2AQ02078 507 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 RHDQ02161 417 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 CD69Q07108 199 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 DDR1Q08345 913 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 IL10RAQ13651 578 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 NOMO1Q15155 1222 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 LLGL1Q15334 1064 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 GORABQ5T7V8 394 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 TRMT10BQ6PF06 316 aaKnown RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 FAM129CQ86XR2 697 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 BCL6BQ8N143 479 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 OSBPL6Q9BZF3 934 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 MYH16Q9H6N6 1097 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 CDC42EP3Q9UKI2 254 aa6.57□□□□□ -1.36
UPF3A-205ENST00000479712 CFAP20Q9Y6A4 193 aaKnown RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 POLR3AO14802 1390 aaPredicted RBP6.57□□□□□ -1.36
UPF3A-205ENST00000479712 RPGRIP1LQ68CZ1 1315 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 FER1L6Q2WGJ9 1857 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 LAMA2P24043 3122 aaKnown RBP6.56□□□□□ -1.36
UPF3A-205ENST00000479712 B3GALT2O43825 422 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 AKR1B10O60218 316 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 UBXN7O94888 489 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 LY86O95711 162 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 ALDH2P05091 517 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 COL6A1P12109 1028 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 HNRNPLP14866 589 aaKnown RBP eCLIP6.56□□□□□ -1.36
UPF3A-205ENST00000479712 STAT5BP51692 787 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 KCNQ1P51787 676 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 HUNKP57058 714 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 MLANAQ16655 118 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 CCDC149Q6ZUS6 474 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 ARHGEF25Q86VW2 580 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 EXOC8Q8IYI6 725 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 IFNL2Q8IZJ0 200 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 FAM43AQ8N2R8 423 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 FAM156AQ8NDB6 213 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 GPR156Q8NFN8 814 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 OR2I1PQ8NGU4 316 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 KAT5Q92993 513 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 C7orf25Q9BPX7 421 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 TMEM60Q9H2L4 133 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 EYSQ5T1H1 3165 aa6.56□□□□□ -1.36
UPF3A-205ENST00000479712 DLEC1Q9Y238 1755 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 A0A1W2PR48 441 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 PMM2O15305 246 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 PRAMEF4O60810 478 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 LTA4HP09960 611 aaKnown RBP6.55□□□□□ -1.36
UPF3A-205ENST00000479712 CTSSP25774 331 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 HTR1BP28222 390 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 MLLT6P55198 1093 aaPredicted RBP6.55□□□□□ -1.36
UPF3A-205ENST00000479712 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
UPF3A-205ENST00000479712 PPP4R3AQ6IN85 833 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 ZCCHC14Q8WYQ9 949 aaKnown RBP6.55□□□□□ -1.36
UPF3A-205ENST00000479712 NKD2Q969F2 451 aaPredicted RBP6.55□□□□□ -1.36
UPF3A-205ENST00000479712 GUCD1Q96NT3 240 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 CGRRF1Q99675 332 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 B3GNT5Q9BYG0 378 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 TAOK3Q9H2K8 898 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 GCM1Q9NP62 436 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 KMT5AQ9NQR1 393 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 PCDHA13Q9Y5I0 950 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 PMF1-BGLAPU3KQ54 211 aa6.55□□□□□ -1.36
UPF3A-205ENST00000479712 FTLP02792 175 aaPredicted RBP6.54□□□□□ -1.36
UPF3A-205ENST00000479712 HMGCRP04035 888 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 HRGP04196 525 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 RPLP2P05387 115 aaKnown RBP6.54□□□□□ -1.36
UPF3A-205ENST00000479712 IL12RB1P42701 662 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 ITPK1Q13572 414 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 KCTD2Q14681 263 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 SEPT2Q15019 361 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 EIF4HQ15056 248 aaKnown RBP6.54□□□□□ -1.36
UPF3A-205ENST00000479712 TTC7BQ86TV6 843 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 CERS3Q8IU89 383 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 RHOT1Q8IXI2 618 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 DRC7Q8IY82 874 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 UNC5BQ8IZJ1 945 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 FBXO15Q8NCQ5 510 aaPredicted RBP6.54□□□□□ -1.36
UPF3A-205ENST00000479712 RGMAQ96B86 450 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 GLIS2Q9BZE0 524 aaPredicted RBP6.54□□□□□ -1.36
UPF3A-205ENST00000479712 STAP2Q9UGK3 403 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 CENPFP49454 3210 aa6.54□□□□□ -1.36
UPF3A-205ENST00000479712 LOC102724159A0A0B4J2E5 919 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 A0A1W2PPC1 479 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 DAPK3O43293 454 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 PHF2O75151 1096 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 EIF3JO75822 258 aaKnown RBP6.53□□□□□ -1.36
UPF3A-205ENST00000479712 ENDOD1O94919 500 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
UPF3A-205ENST00000479712 GAAP10253 952 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 ECHS1P30084 290 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 ADSLP30566 484 aaPredicted RBP6.53□□□□□ -1.36
UPF3A-205ENST00000479712 IL13P35225 146 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 ETV4P43268 484 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 IRAK1P51617 712 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 SESN2P58004 480 aaPredicted RBP6.53□□□□□ -1.36
UPF3A-205ENST00000479712 FAM193AP78312 1265 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 DLG4P78352 724 aa6.53□□□□□ -1.36
UPF3A-205ENST00000479712 TOP3AQ13472 1001 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms