RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 LLGL2Q6P1M3 1020 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 CD300LGQ6UXG3 332 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 EFCAB13Q8IY85 973 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 APPL2Q8NEU8 664 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 TMEM174Q8WUU8 243 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 ANKRD36BP1Q96IX9 119 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 SUSD3Q96L08 255 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 FNIP2Q9P278 1114 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 DPP7Q9UHL4 492 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 TRAF3IP3Q9Y228 551 aa22.16■■□□□ 1.14
VARS-224ENST00000479051 EYSQ5T1H1 3165 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 TNNC2P02585 160 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 CYP24A1Q07973 514 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 COBLL1Q53SF7 1204 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 TMEM184AQ6ZMB5 413 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 ANKS3Q6ZW76 656 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 SMYD4Q8IYR2 804 aaPredicted RBP22.15■■□□□ 1.14
VARS-224ENST00000479051 ZNF560Q96MR9 790 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 FAM50BQ9Y247 325 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 FRMD4BQ9Y2L6 1034 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 HCFC2Q9Y5Z7 792 aa22.15■■□□□ 1.14
VARS-224ENST00000479051 H3BQ06 376 aaPredicted RBP22.14■■□□□ 1.13
VARS-224ENST00000479051 I3L4J1 428 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 TEX28O15482 410 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 TBX10O75333 385 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 GLP2RO95838 553 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 TKTP29401 623 aaKnown RBP22.14■■□□□ 1.13
VARS-224ENST00000479051 LTBRP36941 435 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 PNPLA4P41247 253 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 PSMD6Q15008 389 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 NFIL3Q16649 462 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 PRSS55Q6UWB4 352 aaPredicted RBP22.14■■□□□ 1.13
VARS-224ENST00000479051 DSTYKQ6XUX3 929 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 WDR49Q8IV35 697 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 LNX1Q8TBB1 728 aaPredicted RBP22.14■■□□□ 1.13
VARS-224ENST00000479051 ASB2Q96Q27 587 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 TSG101Q99816 390 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 DZANK1Q9NVP4 752 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 DMAC2Q9NW81 257 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 CD207Q9UJ71 328 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 MAN1B1Q9UKM7 699 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 ITGA11Q9UKX5 1188 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 BARX2Q9UMQ3 279 aaPredicted RBP22.14■■□□□ 1.13
VARS-224ENST00000479051 PCDHB8Q9UN66 801 aa22.14■■□□□ 1.13
VARS-224ENST00000479051 ANO9A1A5B4 782 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 SPDYE4A6NLX3 237 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 H7C4K7 107 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 PIRO00625 290 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 GLUD1P00367 558 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 DLATP10515 647 aaKnown RBP22.13■■□□□ 1.13
VARS-224ENST00000479051 HOXB8P17481 243 aaPredicted RBP22.13■■□□□ 1.13
VARS-224ENST00000479051 TNNI1P19237 187 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 NR2F2P24468 414 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 IGFBP6P24592 240 aaPredicted RBP22.13■■□□□ 1.13
VARS-224ENST00000479051 PRCPP42785 496 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 TAF6P49848 677 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 WNT7BP56706 349 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 KCNC3Q14003 757 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 DUOXA2Q1HG44 320 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 TJAP1Q5JTD0 557 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 CEP135Q66GS9 1140 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 USP37Q86T82 979 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 CCDC127Q96BQ5 260 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 LMBRD1Q9NUN5 540 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 INTS13Q9NVM9 706 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 REV3LO60673 3130 aa22.13■■□□□ 1.13
VARS-224ENST00000479051 PRUNE2Q8WUY3 3088 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 PSMA7O14818 248 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 C1RP00736 705 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 ODC1P11926 461 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 AARSP49588 968 aaKnown RBP eCLIP22.12■■□□□ 1.13
VARS-224ENST00000479051 CLCN4P51793 760 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 LILRA4P59901 499 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 DLX2Q07687 328 aaPredicted RBP22.12■■□□□ 1.13
VARS-224ENST00000479051 CAMK4Q16566 473 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 EDRF1Q3B7T1 1238 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 SV2CQ496J9 727 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 VARS2Q5ST30 1063 aaKnown RBP22.12■■□□□ 1.13
VARS-224ENST00000479051 ANKRD54Q6NXT1 300 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 CSGALNACT2Q8N6G5 542 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 VN1R2Q8NFZ6 395 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 SLC22A17Q8WUG5 538 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 MFSD14AQ96MC6 490 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 CGRRF1Q99675 332 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 MTMR12Q9C0I1 747 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 CLEC1BQ9P126 229 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 MTRRQ9UBK8 725 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 BACE2Q9Y5Z0 518 aa22.12■■□□□ 1.13
VARS-224ENST00000479051 BRWD1Q9NSI6 2320 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 M0QZQ0 153 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 ITGB3P05106 788 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 KRT19P08727 400 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 RBP5P82980 135 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 RBM10P98175 930 aaKnown RBP22.11■■□□□ 1.13
VARS-224ENST00000479051 CLUL1Q15846 466 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 ISM2Q6H9L7 571 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 ZNF280DQ6N043 979 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 TMEM130Q8N3G9 435 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 C1orf127Q8N9H9 656 aa22.11■■□□□ 1.13
VARS-224ENST00000479051 TRIML1Q8N9V2 468 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms