RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 SLC12A6Q9UHW9 1150 aa29.41■■■□□ 2.3
CHKB-208ENST00000479003 PCDHA3Q9Y5H8 950 aa29.41■■■□□ 2.3
CHKB-208ENST00000479003 PODXLO00592 558 aa29.4■■■□□ 2.3
CHKB-208ENST00000479003 PYGMP11217 842 aa29.4■■■□□ 2.3
CHKB-208ENST00000479003 CYP1B1Q16678 543 aa29.4■■■□□ 2.3
CHKB-208ENST00000479003 SLC5A4Q9NY91 659 aa29.4■■■□□ 2.3
CHKB-208ENST00000479003 CA12O43570 354 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 CTGFP29279 349 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 GBP1P32455 592 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 EMC2Q15006 297 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 BRDTQ58F21 947 aaPredicted RBP29.39■■■□□ 2.3
CHKB-208ENST00000479003 ACAD10Q6JQN1 1059 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 ENOSF1Q7L5Y1 443 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 ABHD16BQ9H3Z7 469 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 SNX24Q9Y343 169 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 POLGP54098 1239 aaPredicted RBP29.39■■■□□ 2.3
CHKB-208ENST00000479003 ACVR2BQ13705 512 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 TTC27Q6P3X3 843 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 USP6NLQ92738 828 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 TATDN2Q93075 761 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 GRHL1Q9NZI5 618 aa29.39■■■□□ 2.3
CHKB-208ENST00000479003 A0A087WUV0 522 aaPredicted RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 TULP1O00294 542 aaPredicted RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 SPOPO43791 374 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 AOC2O75106 756 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 ZC3H11AO75152 810 aaKnown RBP eCLIP29.38■■■□□ 2.29
CHKB-208ENST00000479003 GCNT1Q02742 428 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 KRT71Q3SY84 523 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 SPATS2Q86XZ4 545 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 SLC13A5Q86YT5 568 aaPredicted RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 DHX38Q92620 1227 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 BTBD6Q96KE9 485 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 DHX33Q9H6R0 707 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 BCCIPQ9P287 314 aaKnown RBP eCLIP29.38■■■□□ 2.29
CHKB-208ENST00000479003 ATXN2Q99700 1313 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 HNRNPDLO14979 420 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 GH1P01241 217 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 NUDT17P0C025 328 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 PPP2R2AP63151 447 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 TARBP2Q15633 366 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 CCL14Q16627 93 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 CCDC137Q6PK04 289 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 NLRP14Q86W24 1093 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 RUNDC3BQ96NL0 473 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 EPB41L4BQ9H329 900 aa29.38■■■□□ 2.29
CHKB-208ENST00000479003 NOVA2Q9UNW9 492 aaKnown RBP29.38■■■□□ 2.29
CHKB-208ENST00000479003 ADCY6O43306 1168 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 HOXC6P09630 235 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 SMPD1P17405 629 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 PLTPP55058 493 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 LAMC2Q13753 1193 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 CLEC16AQ2KHT3 1053 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 TAS1R3Q7RTX0 852 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 CPNE8Q86YQ8 564 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 ZNF473Q8WTR7 871 aaKnown RBP29.37■■■□□ 2.29
CHKB-208ENST00000479003 PPM1EQ8WY54 764 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 NRBP2Q9NSY0 501 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 MTUS1Q9ULD2 1270 aa29.37■■■□□ 2.29
CHKB-208ENST00000479003 DLATP10515 647 aaKnown RBP29.36■■■□□ 2.29
CHKB-208ENST00000479003 PMS2P54278 862 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 C15orf39Q6ZRI6 1047 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 PLPPR4Q7Z2D5 763 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 MYCBPAPQ8TBZ2 947 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 FBXO25Q8TCJ0 367 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 FAM81BQ96LP2 452 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 POLR3FQ9H1D9 316 aaPredicted RBP29.36■■■□□ 2.29
CHKB-208ENST00000479003 PABPC3Q9H361 631 aaKnown RBP29.36■■■□□ 2.29
CHKB-208ENST00000479003 ARHGAP28Q9P2N2 729 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 PARP2Q9UGN5 583 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 TNPO2O14787 897 aaKnown RBP29.36■■■□□ 2.29
CHKB-208ENST00000479003 CYP2B6P20813 491 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 SIX1Q15475 284 aaPredicted RBP29.36■■■□□ 2.29
CHKB-208ENST00000479003 PRAMEF19Q5SWL8 479 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 TMEM143Q96AN5 459 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 CCT8L2Q96SF2 557 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 CNOT8Q9UFF9 292 aaKnown RBP29.36■■■□□ 2.29
CHKB-208ENST00000479003 GJD2Q9UKL4 321 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 ZSWIM8A7E2V4 1837 aa29.36■■■□□ 2.29
CHKB-208ENST00000479003 H0YCG3 227 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 ABCD1P33897 745 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 RPL21P46778 160 aaKnown RBP29.35■■■□□ 2.29
CHKB-208ENST00000479003 SEC24CP53992 1094 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 RWDD2BP57060 319 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 IFFO1Q0D2I5 559 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 C12orf50Q8NA57 414 aaPredicted RBP29.35■■■□□ 2.29
CHKB-208ENST00000479003 AFG1LQ8WV93 481 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 IFT74Q96LB3 600 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 FAM107AO95990 144 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 COILP38432 576 aaPredicted RBP29.35■■■□□ 2.29
CHKB-208ENST00000479003 NOGQ13253 232 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 PLCB4Q15147 1175 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 DUSP28Q4G0W2 176 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 PPTC7Q8NI37 304 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 SLC7A3Q8WY07 619 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 EMID1Q96A84 441 aaPredicted RBP29.35■■■□□ 2.29
CHKB-208ENST00000479003 TLCD1Q96CP7 247 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 FAM167AQ96KS9 214 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 FAM213AQ9BRX8 229 aa29.35■■■□□ 2.29
CHKB-208ENST00000479003 TCRBV7S2A1N4TA0A589 114 aa29.34■■■□□ 2.29
CHKB-208ENST00000479003 ODF2Q5BJF6 829 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms