RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ECM1Q16610 540 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 MYLK3Q32MK0 819 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 CCDC110Q8TBZ0 833 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 DQX1Q8TE96 717 aaKnown RBP22.45■■□□□ 1.19
SDF4-206ENST00000478938 NIP7Q9Y221 180 aaKnown RBP eCLIP22.45■■□□□ 1.19
SDF4-206ENST00000478938 TMED5Q9Y3A6 229 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 TELO2Q9Y4R8 837 aa22.45■■□□□ 1.19
SDF4-206ENST00000478938 EXOC1LA0A1B0GW35 172 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 GSTTP1A0A1W2PQM5 241 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 MIF4GDA9UHW6 222 aaKnown RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 CLPTM1O96005 669 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 PSMD7P51665 324 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 HIRAP54198 1017 aaPredicted RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 LPIN1Q14693 890 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 TRMT5Q32P41 509 aaKnown RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 MDH1BQ5I0G3 518 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 DGKHQ86XP1 1220 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 ULK2Q8IYT8 1036 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 PYDC1Q8WXC3 89 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 ATG4AQ8WYN0 398 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 TMEM120AQ9BXJ8 343 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 C12orf65Q9H3J6 166 aaKnown RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 SLC7A8Q9UHI5 535 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 DDX25Q9UHL0 483 aaKnown RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 ANAPC5Q9UJX4 755 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 DLEC1Q9Y238 1755 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 MAGEB6P1A0A0J9YX57 407 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 KANSL1LA0AUZ9 987 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 MAGEC1O60732 1142 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 SERPINB7O75635 380 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 ALDH2P05091 517 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 MESDQ14696 234 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 NONOQ15233 471 aaKnown RBP eCLIP22.45■■□□□ 1.182e-10■■■■■ 30.7
SDF4-206ENST00000478938 RNF111Q6ZNA4 994 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 NEK8Q86SG6 692 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 PATL1Q86TB9 770 aaKnown RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 THTPAQ9BU02 230 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 ALG13Q9NP73 1137 aaKnown RBP22.45■■□□□ 1.18
SDF4-206ENST00000478938 SLAIN2Q9P270 581 aa22.45■■□□□ 1.18
SDF4-206ENST00000478938 PLCH1Q4KWH8 1693 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 A0A1W2PPM1 405 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 ATP6V1B1P15313 513 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 ADRA1DP25100 572 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 PEX2P28328 305 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 DYNLL1P63167 89 aaKnown RBP22.44■■□□□ 1.18
SDF4-206ENST00000478938 CDK16Q00536 496 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 PPIDQ08752 370 aaKnown RBP22.44■■□□□ 1.18
SDF4-206ENST00000478938 DHDDSQ86SQ9 333 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 RBM15BQ8NDT2 890 aaKnown RBP22.44■■□□□ 1.18
SDF4-206ENST00000478938 MPHOSPH6Q99547 160 aaKnown RBP22.44■■□□□ 1.18
SDF4-206ENST00000478938 KLHL4Q9C0H6 718 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 STX8Q9UNK0 236 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 SMG5Q9UPR3 1016 aaKnown RBP22.44■■□□□ 1.18
SDF4-206ENST00000478938 GLI3P10071 1580 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 E9PBE3 544 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 DKC1O60832 514 aaKnown RBP eCLIP22.44■■□□□ 1.18
SDF4-206ENST00000478938 GCP02774 474 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 CABP4P57796 275 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 NAA20P61599 178 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 C6orf163Q5TEZ5 329 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 SPTY2D1Q68D10 685 aaPredicted RBP22.44■■□□□ 1.18
SDF4-206ENST00000478938 Q6ZNX1 250 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 NLRX1Q86UT6 975 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 BBS5Q8N3I7 341 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 TTC25Q96NG3 672 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 STK24Q9Y6E0 443 aa22.44■■□□□ 1.18
SDF4-206ENST00000478938 CAMTA1Q9Y6Y1 1673 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 FCHO1O14526 889 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 P4HA2O15460 535 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 XRCC5P13010 732 aaKnown RBP22.43■■□□□ 1.18
SDF4-206ENST00000478938 GYS1P13807 737 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 KRT72Q14CN4 511 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 ANKRD20A4Q4UJ75 823 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 FAM172AQ8WUF8 416 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 DHRS1Q96LJ7 313 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 TRIM55Q9BYV6 548 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 BARHL2Q9NY43 387 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 FAF1Q9UNN5 650 aaPredicted RBP22.43■■□□□ 1.18
SDF4-206ENST00000478938 ZNF148Q9UQR1 794 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 NEU2Q9Y3R4 380 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 BIRC5O15392 142 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 CLDN3O15551 220 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 ENO1P06733 434 aaKnown RBP22.43■■□□□ 1.18
SDF4-206ENST00000478938 PAOXQ6QHF9 649 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 PLA2G12BQ9BX93 195 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 DNAJB4Q9UDY4 337 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 PCDHA2Q9Y5H9 948 aa22.43■■□□□ 1.18
SDF4-206ENST00000478938 COL22A1Q8NFW1 1626 aaPredicted RBP22.42■■□□□ 1.18
SDF4-206ENST00000478938 CYTH3O43739 400 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 STRNO43815 780 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 SOX5P35711 763 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 RXRGP48443 463 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 KCTD21Q4G0X4 260 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 CAPN12Q6ZSI9 719 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 FAM186BQ8IYM0 893 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 TBCKQ8TEA7 893 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 MTBPQ96DY7 904 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 LRRC27Q9C0I9 530 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 NMUR2Q9GZQ4 415 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 NACA2Q9H009 215 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms