RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	RXFP1	Q9HBX9	757 aa		10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	MRPL17	Q9NRX2	175 aa	Known RBP	10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	INTS13	Q9NVM9	706 aa		10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	DPP3	Q9NY33	737 aa		10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	FNIP2	Q9P278	1114 aa		10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	ITGA11	Q9UKX5	1188 aa		10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	NUB1	Q9Y5A7	615 aa		10.26	□□□□□ -0.77
SFI1-222	ENST00000478887	ANK1	P16157	1881 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PPP1R3G	B7ZBB8	358 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887		I3L4J1	428 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887		M0QZQ0	153 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	BIN1	O00499	593 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	SYN3	O14994	580 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	CLASP2	O75122	1294 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	AKAP3	O75969	853 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	GLP2R	O95838	553 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	CNP	P09543	421 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	CCNE1	P24864	410 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	RPL13	P26373	211 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	TKT	P29401	623 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	MCM4	P33991	863 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PMS1	P54277	932 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	LILRA4	P59901	499 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	MCCD1	P59942	119 aa	Predicted RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	CLDN10	P78369	228 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	CREM	Q03060	361 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	ENPEP	Q07075	957 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	SKIV2L	Q15477	1246 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	FAM171A1	Q5VUB5	890 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	ISM2	Q6H9L7	571 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	KIAA1841	Q6NSI8	718 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PDXDC1	Q6P996	788 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	RBM43	Q6ZSC3	357 aa	Known RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	LRRC52	Q8N7C0	313 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	VN1R2	Q8NFZ6	395 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	OR5B17	Q8NGF7	314 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	TMC2	Q8TDI7	906 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PARD3B	Q8TEW8	1205 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	RIN2	Q8WYP3	895 aa	Predicted RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	ANKRD36BP1	Q96IX9	119 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	FAM84A	Q96KN4	292 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	ZNF560	Q96MR9	790 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	KLHL5	Q96PQ7	755 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	FNBP1	Q96RU3	617 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	TSG101	Q99816	390 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	MKNK1	Q9BUB5	465 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	UBE2Z	Q9H832	354 aa	Predicted RBP	10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	SIX4	Q9UIU6	781 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	PCDHB8	Q9UN66	801 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	COG5	Q9UP83	839 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	FRMD4B	Q9Y2L6	1034 aa		10.25	□□□□□ -0.77
SFI1-222	ENST00000478887	TRIM49B	A6NDI0	452 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	C2CD2L	O14523	706 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PER2	O15055	1255 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	SPTLC1	O15269	473 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	TEX28	O15482	410 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	LINC01565	O15544	149 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	TBX10	O75333	385 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	C1R	P00736	705 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	ITGB3	P05106	788 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	DLAT	P10515	647 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	POLR2B	P30876	1174 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	CA8	P35219	290 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PSMC2	P35998	433 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	LTBR	P36941	435 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PNPLA4	P41247	253 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	TAF6	P49848	677 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	FKBP3	Q00688	224 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	ADAM9	Q13443	819 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	ADAM15	Q13444	863 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PSMD5	Q16401	504 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	DUOXA2	Q1HG44	320 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	CEP135	Q66GS9	1140 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	ANKRD40	Q6AI12	368 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	TTI2	Q6NXR4	508 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	TMEM184A	Q6ZMB5	413 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	ANKS3	Q6ZW76	656 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	INTS8	Q75QN2	995 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	RBM23	Q86U06	439 aa	Known RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PPFIBP1	Q86W92	1011 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	FAM186B	Q8IYM0	893 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	LNX1	Q8TBB1	728 aa	Predicted RBP	10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	HLA-C	Q95604	372 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	CCDC127	Q96BQ5	260 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	EMILIN2	Q9BXX0	1053 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	PRDM6	Q9NQX0	595 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	CLDND1	Q9NY35	253 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	THEG	Q9P2T0	379 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	MTRR	Q9UBK8	725 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	HCFC2	Q9Y5Z7	792 aa		10.24	□□□□□ -0.77
SFI1-222	ENST00000478887	BICDL2	A1A5D9	508 aa		10.23	□□□□□ -0.77
SFI1-222	ENST00000478887	CETN3	O15182	167 aa		10.23	□□□□□ -0.77
SFI1-222	ENST00000478887	SLC16A3	O15427	465 aa	Known RBP	10.23	□□□□□ -0.77
SFI1-222	ENST00000478887	TBC1D4	O60343	1298 aa		10.23	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms