RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
CBWD3-206ENST00000478048 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.42
CBWD3-206ENST00000478048 SPATA1Q5VX52 437 aa12.4□□□□□ -0.42
CBWD3-206ENST00000478048 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
CBWD3-206ENST00000478048 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
CBWD3-206ENST00000478048 NLRC5Q86WI3 1866 aa12.4□□□□□ -0.42
CBWD3-206ENST00000478048 NT5C1B-RDH14C9J2C7 533 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 F8W810 466 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 SOX1O00570 391 aaPredicted RBP12.4□□□□□ -0.43
CBWD3-206ENST00000478048 TNNI1P19237 187 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 SLC11A1P49279 550 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 VAMP7P51809 220 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 TFAMQ00059 246 aaKnown RBP12.4□□□□□ -0.43
CBWD3-206ENST00000478048 BFSP1Q12934 665 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 TUSC3Q13454 348 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 RAB30Q15771 203 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 CCDC40Q4G0X9 1142 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 LRSAM1Q6UWE0 723 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 INTS8Q75QN2 995 aaKnown RBP12.4□□□□□ -0.43
CBWD3-206ENST00000478048 DHX40Q8IX18 779 aaKnown RBP12.4□□□□□ -0.43
CBWD3-206ENST00000478048 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.43
CBWD3-206ENST00000478048 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.43
CBWD3-206ENST00000478048 FNBP1Q96RU3 617 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 CGRRF1Q99675 332 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 C17orf80Q9BSJ5 609 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 MTMR12Q9C0I1 747 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 MSRAQ9UJ68 235 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 C2CD2Q9Y426 696 aa12.4□□□□□ -0.43
CBWD3-206ENST00000478048 SCN1AP35498 2009 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 SZT2Q5T011 3432 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 PPEF2O14830 753 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 GALTP07902 379 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 KRT13P13646 458 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 OR1G1P47890 313 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 CLCNKBP51801 687 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 BCAR1P56945 870 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 ZNF445P59923 1031 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 MYL5Q02045 173 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 TAP1Q03518 808 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 IQCB1Q15051 598 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 SURF1Q15526 300 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 FRMD5Q7Z6J6 570 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 TMEM173Q86WV6 379 aaPredicted RBP12.39□□□□□ -0.43
CBWD3-206ENST00000478048 CREBRFQ8IUR6 639 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 WDR49Q8IV35 697 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 COLGALT1Q8NBJ5 622 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 CNOT6LQ96LI5 555 aaKnown RBP12.39□□□□□ -0.43
CBWD3-206ENST00000478048 BPIFA3Q9BQP9 254 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
CBWD3-206ENST00000478048 HSD3B7Q9H2F3 369 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 CBX8Q9HC52 389 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 INTS13Q9NVM9 706 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 FANCLQ9NW38 375 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 ARMCX3Q9UH62 379 aaPredicted RBP12.39□□□□□ -0.43
CBWD3-206ENST00000478048 MTUS1Q9ULD2 1270 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 UBQLN1Q9UMX0 589 aaKnown RBP12.39□□□□□ -0.43
CBWD3-206ENST00000478048 PRG3Q9Y2Y8 225 aaPredicted RBP12.39□□□□□ -0.43
CBWD3-206ENST00000478048 DERAQ9Y315 318 aa12.39□□□□□ -0.43
CBWD3-206ENST00000478048 NRP1O14786 923 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
CBWD3-206ENST00000478048 CLDN10P78369 228 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 PPP3CAQ08209 521 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
CBWD3-206ENST00000478048 DCAF17Q5H9S7 520 aaPredicted RBP12.38□□□□□ -0.43
CBWD3-206ENST00000478048 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 KCNT2Q6UVM3 1135 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 C1orf127Q8N9H9 656 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 CXorf38Q8TB03 319 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
CBWD3-206ENST00000478048 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 THAP9Q9H5L6 903 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 CERS4Q9HA82 394 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 DPP3Q9NY33 737 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 MYO7AQ13402 2215 aa12.38□□□□□ -0.43
CBWD3-206ENST00000478048 RCCD1A6NED2 376 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ALDH2P05091 517 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ITGB1P05556 798 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 CYP3A5P20815 502 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 GCLMP48507 274 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 MARSP56192 900 aaKnown RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-206ENST00000478048 UPP1Q16831 310 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 CD300LGQ6UXG3 332 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TRIM59Q8IWR1 403 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 BEST2Q8NFU1 509 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 HASPINQ8TF76 798 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 SLC35C1Q96A29 364 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
CBWD3-206ENST00000478048 TSPAN18Q96SJ8 248 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms