RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RAXQ9Y2V3 346 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 PPME1Q9Y570 386 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 INSL5Q9Y5Q6 135 aa8.13□□□□□ -1.11
SPTLC1-205ENST00000477888 CACNA1EQ15878 2313 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 TMEM189-UBE2V1I3L0A0 370 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 INO80B-WBP1J3KQ70 363 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 TK2O00142 265 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 B4GALT5O43286 388 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 NPTXRO95502 500 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 THP07101 528 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 MYL4P12829 197 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 TKTP29401 623 aaKnown RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 RFC5P40937 340 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 CACNB1Q02641 598 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 TNK2Q07912 1038 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 LMAN2Q12907 356 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 KARSQ15046 597 aaKnown RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 ARHGAP29Q52LW3 1261 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 IQCEQ6IPM2 695 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 CCNI2Q6ZMN8 369 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 GPIHBP1Q8IV16 184 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 ARID3BQ8IVW6 561 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 SHKBP1Q8TBC3 707 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 TCP11Q8WWU5 503 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 CHFRQ96EP1 664 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 CEP170P1Q96L14 293 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 ZNF512Q96ME7 567 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 HHIPQ96QV1 700 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 CYP4F11Q9HBI6 524 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 C6orf50Q9HD87 102 aa8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 RBM28Q9NW13 759 aaKnown RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 WRAP73Q9P2S5 460 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 EVLQ9UI08 416 aaPredicted RBP8.12□□□□□ -1.11
SPTLC1-205ENST00000477888 EML1O00423 815 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 TRDMT1O14717 391 aaKnown RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 B3GAT3O94766 335 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 QARSP47897 775 aaKnown RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 GRSF1Q12849 480 aaKnown RBP eCLIP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 MXD4Q14582 209 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 PFKFB3Q16875 520 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 Q4G0T1 1027 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 SYT13Q7L8C5 426 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 CHD1LQ86WJ1 897 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 SMC5Q8IY18 1101 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 KRI1Q8N9T8 703 aaKnown RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 C3orf58Q8NDZ4 430 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 MDM1Q8TC05 714 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 NFKBIZQ9BYH8 718 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 LRRC2Q9BYS8 371 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 FBRSL1Q9HCM7 1045 aaKnown RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 ASAH2Q9NR71 780 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 BMP2KQ9NSY1 1161 aaPredicted RBP8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 OBP2AQ9NY56 170 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 INVSQ9Y283 1065 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
SPTLC1-205ENST00000477888 CYP3A7-CYP3A51PA0A087WV96 503 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 A0A1W2PRU2 124 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 PCNX2A6NKB5 2137 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 I3L4J1 428 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 TRAPPC3O43617 180 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 RNF40O75150 1001 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 APBB3O95704 486 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 CYP3A7P24462 503 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 GNA11P29992 359 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 GBP1P32455 592 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 MAPK8P45983 427 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 BRCC3P46736 316 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 CLCNKBP51801 687 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 TWF1Q12792 350 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 EMC2Q15006 297 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 RTN1Q16799 776 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 UPP1Q16831 310 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 ITPRIPL2Q3MIP1 535 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 TRIM61Q5EBN2 209 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 STXBP5Q5T5C0 1151 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 TPGS2Q68CL5 300 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 B4GALNT3Q6L9W6 998 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 APOA5Q6Q788 366 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 CYP2U1Q7Z449 544 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 HAUS6Q7Z4H7 955 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 C11orf74Q86VG3 221 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 ELMOD1Q8N336 334 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 ETNPPLQ8TBG4 499 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 ADAMTS14Q8WXS8 1223 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 SLC39A7Q92504 469 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 PIGKQ92643 395 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 CRELD1Q96HD1 420 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 UBL7Q96S82 380 aaPredicted RBP8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 FAM83CQ9BQN1 747 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 SLITRK6Q9H5Y7 841 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 XPNPEP1Q9NQW7 623 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 IGSF5Q9NSI5 407 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 TMEM74BQ9NUR3 256 aa8.1□□□□□ -1.11
SPTLC1-205ENST00000477888 MBD1Q9UIS9 605 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms