RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 NBPF7P0C2Y1 421 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 FTH1P19P0C7X4 201 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 MALP21145 153 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 PTGS2P35354 604 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 USP14P54578 494 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 RAP2BP61225 183 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 GPSM2P81274 684 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 HDAC1Q13547 482 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 UBXN2BQ14CS0 331 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 COBLL1Q53SF7 1204 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 AGAP9Q5VTM2 703 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 METRNLQ641Q3 311 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 ZNF529Q6P280 563 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 DARS2Q6PI48 645 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 CCDC149Q6ZUS6 474 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 HEATR3Q7Z4Q2 680 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 ZNF276Q8N554 614 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 LENG9Q96B70 501 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 C11orf54Q9H0W9 315 aaPredicted RBP5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 A0A088AWK7 358 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 CAPN8A6NHC0 703 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 LRRC14BA6NHZ5 514 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 RNASET2O00584 256 aaKnown RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 TPP1O14773 563 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 MAP4K4O95819 1239 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 SPATA31D3P0C874 917 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 AGFG1P52594 562 aaKnown RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 CHN2P52757 468 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 CACNB3P54284 484 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM193AP78312 1265 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 TLE1Q04724 770 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 FNDC7Q5VTL7 733 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 NPNTQ6UXI9 565 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 SPATA31D4Q6ZUB0 917 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 KIAA0319LQ8IZA0 1049 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 Q8N1X5 172 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 NLGN4YQ8NFZ3 816 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 PJA1Q8NG27 643 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 ZNF483Q8TF39 744 aaPredicted RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 MYOCQ99972 504 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 LRFN3Q9BTN0 628 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 B3GNT5Q9BYG0 378 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 REXO4Q9GZR2 422 aaKnown RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 WDCPQ9H6R7 721 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 DDX21Q9NR30 783 aaKnown RBP eCLIP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 GNL3LQ9NVN8 582 aaKnown RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 PNPOQ9NVS9 261 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 TRPM5Q9NZQ8 1165 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 FZD1Q9UP38 647 aa5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 RUVBL1Q9Y265 456 aaKnown RBP5.79□□□□□ -1.48
SMNDC1-205ENST00000477763 NARSO43776 548 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 ZNF202O95125 648 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 MTHFD1P11586 935 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 PHKG2P15735 406 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 RHCEP18577 417 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 ZNF280AP59817 542 aaPredicted RBP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 RNASE9P60153 205 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 RHDQ02161 417 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 SNAPC2Q13487 334 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 FGL2Q14314 439 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 SAFBQ15424 915 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 KIAA0753Q2KHM9 967 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 PABPC1LQ4VXU2 614 aaKnown RBP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 USP51Q70EK9 711 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 MED25Q71SY5 747 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 RHOUQ7L0Q8 258 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 C11orf96Q7Z7L8 435 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 SH2D3CQ8N5H7 860 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 DCBLD1Q8N8Z6 715 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM156AQ8NDB6 213 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 FBXO41Q8TF61 875 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 HAS1Q92839 578 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 SLC35A4Q96G79 324 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 FBXO34Q9NWN3 711 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 GPRC5BQ9NZH0 403 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 ABCF2Q9UG63 623 aa5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 FEZ2Q9UHY8 353 aaPredicted RBP5.78□□□□□ -1.48
SMNDC1-205ENST00000477763 NPIPB8E9PQR5 432 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 GOLIM4O00461 696 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 RPS6KA4O75676 772 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 TYRP14679 529 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 MAKP20794 623 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 NR4A1P22736 598 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 GCSHP23434 173 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 MCM7P33993 719 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 ACVRL1P37023 503 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 PTTG1IPP53801 180 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 NKX6-1P78426 367 aaPredicted RBP5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 PICALMQ13492 652 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 FLYWCH1Q4VC44 716 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 PDCD4Q53EL6 469 aaKnown RBP5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 RNF220Q5VTB9 566 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 CYB5RLQ6IPT4 315 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 ARMC6Q6NXE6 501 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 SYNE4Q8N205 404 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 IL17RDQ8NFM7 739 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 MYEOVQ96EZ4 313 aa5.77□□□□□ -1.49
SMNDC1-205ENST00000477763 NEU1Q99519 415 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms