RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TDO2P48775 406 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 RBM25P49756 843 aaKnown RBP5.39□□□□□ -1.55
CKS1B-207ENST00000477676 DEFB103AP81534 67 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 BBS9Q3SYG4 887 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 VWA3BQ502W6 1294 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 SEZ6Q53EL9 994 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 ZC3H14Q6PJT7 736 aaKnown RBP5.39□□□□□ -1.55
CKS1B-207ENST00000477676 BTNL9Q6UXG8 535 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 LIPIQ6XZB0 460 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 ERMP1Q7Z2K6 904 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 FAM160B2Q86V87 743 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 HERC6Q8IVU3 1022 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 DDX1Q92499 740 aaKnown RBP5.39□□□□□ -1.55
CKS1B-207ENST00000477676 TBC1D5Q92609 795 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 ANKS1AQ92625 1134 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 KAT2BQ92831 832 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 MTG1Q9BT17 334 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-207ENST00000477676 MTIF3Q9H2K0 278 aaKnown RBP5.39□□□□□ -1.55
CKS1B-207ENST00000477676 CPVLQ9H3G5 476 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 DCTPP1Q9H773 170 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 SUSD2Q9UGT4 822 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 CTDP1Q9Y5B0 961 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-207ENST00000477676 EVPLQ92817 2033 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 COL4A6Q14031 1691 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 KMT2EQ8IZD2 1858 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF292O60281 2723 aa5.39□□□□□ -1.55
CKS1B-207ENST00000477676 FAM186AA6NE01 2351 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 PI4K2BG5E9Z4 385 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 ZEB2O60315 1214 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 NBNO60934 754 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF205O95201 554 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 APPP05067 770 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 PFKMP08237 780 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 VAV1P15498 845 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 GNAT2P19087 354 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 GARTP22102 1010 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 WDR5P61964 334 aaKnown RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 RPS6P62753 249 aaKnown RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 ARHGAP1Q07960 439 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 IKQ13123 557 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 AUHQ13825 339 aaKnown RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 TRIM71Q2Q1W2 868 aaKnown RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 CPZQ66K79 652 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 NFRKBQ6P4R8 1299 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 CYP2R1Q6VVX0 501 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 DNAJC14Q6Y2X3 702 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 OR6J1Q8NGC5 347 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 PHOSPHO2Q8TCD6 241 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 NKD1Q969G9 470 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 SLC6A18Q96N87 628 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 RBM15Q96T37 977 aaKnown RBP eCLIP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 SLC9A7Q96T83 725 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 TMEM47Q9BQJ4 181 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 C1QTNF1Q9BXJ1 281 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 SEZ6LQ9BYH1 1024 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 GFOD1Q9NXC2 390 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 COL20A1Q9P218 1284 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 ANAPC4Q9UJX5 808 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 DBR1Q9UK59 544 aaKnown RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 ACSL6Q9UKU0 697 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 ISY1Q9ULR0 285 aaKnown RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 STX8Q9UNK0 236 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 FAN1Q9Y2M0 1017 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 FRMPD2Q68DX3 1309 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-207ENST00000477676 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
CKS1B-207ENST00000477676 PTPDC1A2A3K4 754 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 LINC01553A4QN01 128 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 ORC4O43929 436 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 RANBP6O60518 1105 aaKnown RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 CXCL10P02778 98 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 ZFYP08048 801 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 SNHG28P0DPA3 235 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 PDHBP11177 359 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 IL9P15248 144 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 NME1P15531 152 aaKnown RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 CALML3P27482 149 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 CNR2P34972 360 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 RFC2P35250 354 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 MAPKAPK2P49137 400 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 CPT1AP50416 773 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 ZNF200P98182 395 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 SNW1Q13573 536 aaKnown RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 PTGISQ16647 500 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 LY6KQ17RY6 165 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 FAM47CQ5HY64 1035 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 TMEM31Q5JXX7 168 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 RPTNQ6XPR3 784 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 SLCO6A1Q86UG4 719 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.37□□□□□ -1.55
CKS1B-207ENST00000477676 FNIP1Q8TF40 1166 aa5.37□□□□□ -1.55
CKS1B-207ENST00000477676 DCAF4Q8WV16 495 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms