RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PPP2R2DQ66LE6 453 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 IRF2BP1Q8IU81 584 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 COLGALT1Q8NBJ5 622 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 SLC35C1Q96A29 364 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 UROC1Q96N76 676 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 ZNF558Q96NG5 402 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 TMEM175Q9BSA9 504 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 SLC28A3Q9HAS3 691 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 DPP3Q9NY33 737 aa16.55■□□□□ 0.24
SEC13-215ENST00000477547 PODXLO00592 558 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 STX10O60499 249 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 ITGB3P05106 788 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 LINC00271P0C7V0 271 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 GCLMP48507 274 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 MXI1P50539 228 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 AP3M2P53677 418 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 BCAR1P56945 870 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 TPM4P67936 248 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 CLDN10P78369 228 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 DUOXA2Q1HG44 320 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 C1orf127Q8N9H9 656 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 RABGGTAQ92696 567 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 CLP1Q92989 425 aaKnown RBP16.54■□□□□ 0.24
SEC13-215ENST00000477547 PAAF1Q9BRP4 392 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 AAASQ9NRG9 546 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 ITGA11Q9UKX5 1188 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 RWDD3Q9Y3V2 267 aa16.54■□□□□ 0.24
SEC13-215ENST00000477547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
SEC13-215ENST00000477547 GOLGA6L19H0YKK7 550 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 CLSTN1O94985 981 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 KIF4AO95239 1232 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 KRT19P08727 400 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 ZNF18P17022 549 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 LRPAP1P30533 357 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 POLR2BP30876 1174 aaKnown RBP16.53■□□□□ 0.24
SEC13-215ENST00000477547 PPM1AP35813 382 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 PIK3CAP42336 1068 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 ALDH7A1P49419 539 aaKnown RBP16.53■□□□□ 0.24
SEC13-215ENST00000477547 CLCNKBP51801 687 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 MYL7Q01449 175 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 PPP3CAQ08209 521 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 MAN2A1Q16706 1144 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 TCP11X2Q5H9J9 407 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
SEC13-215ENST00000477547 KCNT2Q6UVM3 1135 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 SPRED2Q7Z698 418 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 ANKRD20A12PQ8NF67 263 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 HASPINQ8TF76 798 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 ZNF516Q92618 1163 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 DDX27Q96GQ7 796 aaKnown RBP16.53■□□□□ 0.24
SEC13-215ENST00000477547 ZNF560Q96MR9 790 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 HSD3B7Q9H2F3 369 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 TMEM8AQ9HCN3 771 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
SEC13-215ENST00000477547 CARNS1A5YM72 827 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 NT5C1B-RDH14C9J2C7 533 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 F8W810 466 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 NRP1O14786 923 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 PPEF2O14830 753 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 PHACTR2O75167 634 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 GALTP07902 379 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
SEC13-215ENST00000477547 GTF2H1P32780 548 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 RPL9P32969 192 aaKnown RBP16.52■□□□□ 0.24
SEC13-215ENST00000477547 TAP1Q03518 808 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.24
SEC13-215ENST00000477547 UPP1Q16831 310 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 ZACNQ401N2 412 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 C9orf57Q5W0N0 161 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 TMEM173Q86WV6 379 aaPredicted RBP16.52■□□□□ 0.24
SEC13-215ENST00000477547 SLC39A11Q8N1S5 342 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 TGS1Q96RS0 853 aaKnown RBP16.52■□□□□ 0.24
SEC13-215ENST00000477547 C17orf80Q9BSJ5 609 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 MARCH5Q9NX47 278 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 SIX4Q9UIU6 781 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 FAN1Q9Y2M0 1017 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 HCN4Q9Y3Q4 1203 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 R3HCC1Q9Y3T6 440 aaKnown RBP16.52■□□□□ 0.24
SEC13-215ENST00000477547 PCDHB12Q9Y5F1 795 aa16.52■□□□□ 0.24
SEC13-215ENST00000477547 TMEM189-UBE2V1I3L0A0 370 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 N4BP1O75113 896 aaKnown RBP16.51■□□□□ 0.23
SEC13-215ENST00000477547 B3GAT3O94766 335 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 AFPP02771 609 aaKnown RBP16.51■□□□□ 0.23
SEC13-215ENST00000477547 ATP1A3P13637 1013 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 FMO5P49326 533 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 MCCD1P59942 119 aaPredicted RBP16.51■□□□□ 0.23
SEC13-215ENST00000477547 KRT31Q15323 416 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 KRT39Q6A163 491 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 C15orf39Q6ZRI6 1047 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 SV2AQ7L0J3 742 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 C3orf58Q8NDZ4 430 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
SEC13-215ENST00000477547 SAMD11Q96NU1 681 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms