RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	B3GAT3	O94766	335 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	KIF4A	O95239	1232 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	FGFR1OP	O95684	399 aa	Known RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	TNNC2	P02585	160 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	VAMP7	P51809	220 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	TYRO3	Q06418	890 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	ENPEP	Q07075	957 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	BFSP1	Q12934	665 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	TPD52L1	Q16890	204 aa	Predicted RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	LMBRD2	Q68DH5	695 aa	Predicted RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732		Q7L0L9	218 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	FILIP1	Q7Z7B0	1213 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	DDX53	Q86TM3	631 aa	Known RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	TMEM173	Q86WV6	379 aa	Predicted RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	SPPL3	Q8TCT6	385 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	TMC2	Q8TDI7	906 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	PARD3B	Q8TEW8	1205 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	POF1B	Q8WVV4	589 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	GAS2L1	Q99501	681 aa	Predicted RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	POP1	Q99575	1024 aa	Known RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	SRRT	Q9BXP5	876 aa	Known RBP	10.83	□□□□□ -0.68
DMD-223	ENST00000475732	LMAN2L	Q9H0V9	348 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	INTS13	Q9NVM9	706 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	MARCH5	Q9NX47	278 aa		10.83	□□□□□ -0.68
DMD-223	ENST00000475732	ATG2A	Q2TAZ0	1938 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	SZT2	Q5T011	3432 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	SYCE3	A1L190	88 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732		F8W810	466 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	IKBKB	O14920	756 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	GRM6	O15303	877 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	TRAPPC3	O43617	180 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	CCDC192	P0DO97	292 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	GUCY2F	P51841	1108 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	AP3M2	P53677	418 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	CLDN10	P78369	228 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	ELAVL2	Q12926	359 aa	Known RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	PTPRO	Q16827	1216 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	CCDC40	Q4G0X9	1142 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	C9orf57	Q5W0N0	161 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	FUT10	Q6P4F1	479 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	FRMD5	Q7Z6J6	570 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	OR5B17	Q8NGF7	314 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	PLEKHO2	Q8TD55	490 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	HASPIN	Q8TF76	798 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	MED15	Q96RN5	788 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	MTMR12	Q9C0I1	747 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	GZF1	Q9H116	711 aa	Predicted RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	METTL14	Q9HCE5	456 aa	Known RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	TLR9	Q9NR96	1032 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	LMCD1	Q9NZU5	365 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	ITGA11	Q9UKX5	1188 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	NUB1	Q9Y5A7	615 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
DMD-223	ENST00000475732	PTPRJ	Q12913	1337 aa		10.82	□□□□□ -0.68
DMD-223	ENST00000475732	ANO9	A1A5B4	782 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	C2orf72	A6NCS6	295 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	PIR	O00625	290 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	STX10	O60499	249 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	LPXN	O60711	386 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	GNA14	O95837	355 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	SOD2	P04179	222 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	ITGB3	P05106	788 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	KRT19	P08727	400 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	PAX3	P23760	479 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	DNAJB1	P25685	340 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	MCCD1	P59942	119 aa	Predicted RBP	10.81	□□□□□ -0.68
DMD-223	ENST00000475732	DLG4	P78352	724 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	RBP5	P82980	135 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	BMS1	Q14692	1282 aa	Known RBP	10.81	□□□□□ -0.68
DMD-223	ENST00000475732	ZSCAN23	Q3MJ62	389 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	PDE12	Q6L8Q7	609 aa	Known RBP	10.81	□□□□□ -0.68
DMD-223	ENST00000475732	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.81	□□□□□ -0.68
DMD-223	ENST00000475732	TRAPPC11	Q7Z392	1133 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	TMC7	Q7Z402	723 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	VPS52	Q8N1B4	723 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	TMEM130	Q8N3G9	435 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	C1orf127	Q8N9H9	656 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	C3orf58	Q8NDZ4	430 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	ZNF516	Q92618	1163 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	BORCS6	Q96GS4	357 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	CDX2	Q99626	313 aa	Predicted RBP	10.81	□□□□□ -0.68
DMD-223	ENST00000475732	GPR62	Q9BZJ7	368 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	NAT10	Q9H0A0	1025 aa	Known RBP	10.81	□□□□□ -0.68
DMD-223	ENST00000475732	DNAJC25	Q9H1X3	360 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	MTMR10	Q9NXD2	777 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	AGAP1	Q9UPQ3	857 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	VWA8	A3KMH1	1905 aa		10.81	□□□□□ -0.68
DMD-223	ENST00000475732	CDH23	Q9H251	3354 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	PPEF2	O14830	753 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	PHACTR2	O75167	634 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	EFEMP2	O95967	443 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	TRIM49	P0CI25	452 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	TRIM49C	P0CI26	452 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	POU3F3	P20264	500 aa	Predicted RBP	10.8	□□□□□ -0.68
DMD-223	ENST00000475732	IGFBP4	P22692	258 aa		10.8	□□□□□ -0.68
DMD-223	ENST00000475732	POLR2B	P30876	1174 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms