RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 TNRC18O15417 2968 aaPredicted RBP16.33■□□□□ 0.2
MCF2L-224ENST00000475524 ARHGEF37A1IGU5 675 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 PODXLO00592 558 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 VNN1O95497 513 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 ASS1P00966 412 aaKnown RBP16.32■□□□□ 0.2
MCF2L-224ENST00000475524 ALDH2P05091 517 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 RFX1P22670 979 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 POLR2BP30876 1174 aaKnown RBP16.32■□□□□ 0.2
MCF2L-224ENST00000475524 SCN1AP35498 2009 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 PPM1AP35813 382 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
MCF2L-224ENST00000475524 RAB30Q15771 203 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 SV2CQ496J9 727 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 FAM117BQ6P1L5 589 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 ZNF280BQ86YH2 543 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 TAS1R2Q8TE23 839 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 SAMD11Q96NU1 681 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 COLEC11Q9BWP8 271 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 XYLT2Q9H1B5 865 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 PLCB1Q9NQ66 1216 aa16.32■□□□□ 0.2
MCF2L-224ENST00000475524 CEP290O15078 2479 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
MCF2L-224ENST00000475524 GALTP07902 379 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 FAM163BP0C2L3 166 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 ALDH7A1P49419 539 aaKnown RBP16.31■□□□□ 0.2
MCF2L-224ENST00000475524 TAF6P49848 677 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 CLCNKBP51801 687 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 UBXN1Q04323 297 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 ELAVL2Q12926 359 aaKnown RBP16.31■□□□□ 0.2
MCF2L-224ENST00000475524 PAN2Q504Q3 1202 aaKnown RBP16.31■□□□□ 0.2
MCF2L-224ENST00000475524 WDR44Q5JSH3 913 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 TMCO2Q7Z6W1 182 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-224ENST00000475524 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 LMO3Q8TAP4 145 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 SPATA18Q8TC71 538 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 IQCDQ96DY2 449 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 PLVAPQ9BX97 442 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 GOLGA2P5Q9HBQ8 144 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 GDAP2Q9NXN4 497 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 FBXL5Q9UKA1 691 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 AGAP1Q9UPQ3 857 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 FAN1Q9Y2M0 1017 aa16.31■□□□□ 0.2
MCF2L-224ENST00000475524 MRPL42Q9Y6G3 142 aaKnown RBP16.31■□□□□ 0.2
MCF2L-224ENST00000475524 CASTOR2A6NHX0 329 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 TRAPPC3O43617 180 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 B4GALT3O60512 393 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 CST3P01034 146 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-224ENST00000475524 KRT19P08727 400 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 LINC00271P0C7V0 271 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 P4HA1P13674 534 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 SLC11A1P49279 550 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 BCAR1P56945 870 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 SMAD3P84022 425 aaKnown RBP16.3■□□□□ 0.2
MCF2L-224ENST00000475524 GSE1Q14687 1217 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 ZNF699Q32M78 642 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 TRIM65Q6PJ69 517 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 KCNT2Q6UVM3 1135 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 DPH6Q7L8W6 267 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 MRFAP1L1Q96HT8 127 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 NAP1L5Q96NT1 182 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-224ENST00000475524 XPO4Q9C0E2 1151 aaKnown RBP16.3■□□□□ 0.2
MCF2L-224ENST00000475524 GRPEL1Q9HAV7 217 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 SIK3Q9Y2K2 1263 aa16.3■□□□□ 0.2
MCF2L-224ENST00000475524 TSC2P49815 1807 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 ITIH6Q6UXX5 1313 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 KPNA7A9QM74 516 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 C5orf67F2Z3F1 127 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 NRP1O14786 923 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 B3GAT3O94766 335 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 RB1P06400 928 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-224ENST00000475524 PON1P27169 355 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 PBX1P40424 430 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 OR1G1P47890 313 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 MRE11P49959 708 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 LILRA4P59901 499 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 MYL6P60660 151 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
MCF2L-224ENST00000475524 GCNT1Q02742 428 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 FIGNQ5HY92 759 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 ZNF667Q5HYK9 610 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 PRPF38BQ5VTL8 546 aaKnown RBP16.29■□□□□ 0.2
MCF2L-224ENST00000475524 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 SEMA4DQ92854 862 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
MCF2L-224ENST00000475524 INTS2Q9H0H0 1204 aaKnown RBP16.29■□□□□ 0.2
MCF2L-224ENST00000475524 MSRAQ9UJ68 235 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms