RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 MATR3P43243 847 aaKnown RBP eCLIP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 PRSS12P56730 875 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 TMEM62Q0P6H9 643 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 NCOA4Q13772 614 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 DRAP1Q14919 205 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 SEZ6Q53EL9 994 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 FBXO47Q5MNV8 452 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 GJB7Q6PEY0 223 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 TOGARAM2Q6ZUX3 1019 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 MRPL10Q7Z7H8 261 aaKnown RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ARHGEF19Q8IW93 802 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 THNSL1Q8IYQ7 743 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 SLC30A5Q8TAD4 765 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF333Q96JL9 665 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 PPP1R13BQ96KQ4 1090 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 SNX27Q96L92 541 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 NT5C1BQ96P26 610 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 ACAP3Q96P50 834 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 XYLT2Q9H1B5 865 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 APOBEC3GQ9HC16 384 aaKnown RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 UBE2TQ9NPD8 197 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 STARD7Q9NQZ5 370 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 PDE4DIPQ5VU43 2346 aa7.13□□□□□ -1.27
ATG4A-207ENST00000474825 KIAA0100Q14667 2235 aaKnown RBP7.13□□□□□ -1.27
ATG4A-207ENST00000474825 KAT6AQ92794 2004 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 USP27XA6NNY8 438 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 KBTBD13C9JR72 458 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 M0QZ92 97 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 FOXN3O00409 490 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 GPR182O15218 404 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 INPPL1O15357 1258 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 PJA2O43164 708 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 RPS6KA5O75582 802 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CCDC175P0C221 793 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CCDC172P0C7W6 258 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CXCL8P10145 99 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 COL6A1P12109 1028 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CKBP12277 381 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CYP3A5P20815 502 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 ATICP31939 592 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CYLC1P35663 651 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 EIF4A3P38919 411 aaKnown RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 ARHGAP25P42331 645 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 MFAP3P55082 362 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 KRT83P78385 493 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 PTK2Q05397 1052 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 LPIN1Q14693 890 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 MTFR1Q15390 333 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 ASIC2Q16515 512 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SLC18A3Q16572 532 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SGSM1Q2NKQ1 1148 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 FAM47CQ5HY64 1035 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 C10orf76Q5T2E6 689 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 PRPF38BQ5VTL8 546 aaKnown RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SCARA3Q6AZY7 606 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 ANKRD33Q7Z3H0 272 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF571Q7Z3V5 609 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CDR2LQ86X02 465 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 FAM126BQ8IXS8 530 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 C17orf53Q8N3J3 647 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 C1orf127Q8N9H9 656 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SMG8Q8ND04 991 aaKnown RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CAGE1Q8TC20 777 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 TATDN2Q93075 761 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CCDC42Q96M95 316 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SCLT1Q96NL6 688 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SPAG5Q96R06 1193 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 PPP1R16BQ96T49 567 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 CCDC94Q9BW85 323 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 EIF2AQ9BY44 585 aaKnown RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 AGO3Q9H9G7 860 aaKnown RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 TRMT13Q9NUP7 481 aaKnown RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 SIX4Q9UIU6 781 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 ST3GAL5Q9UNP4 418 aa7.12□□□□□ -1.27
ATG4A-207ENST00000474825 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-207ENST00000474825 A0A0U1RQF3 1178 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 ANO9A1A5B4 782 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 BTNL10A8MVZ5 291 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 KIF2AO00139 706 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 SGPL1O95470 568 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 NPTXRO95502 500 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 TNNC2P02585 160 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 PLEKP08567 350 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 NFICP08651 508 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 HARSP12081 509 aaKnown RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 EN2P19622 333 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 TBXAS1P24557 533 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 THPOP40225 353 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 KIF11P52732 1056 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF132P52740 706 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 CHMP4BP1P59074 171 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 FAM189BP81408 668 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 KLHL30Q0D2K2 578 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 CUL2Q13617 745 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 RAPGEF1Q13905 1077 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 BMS1Q14692 1282 aaKnown RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 MBTPS1Q14703 1052 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 GPNMBQ14956 572 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 WDR44Q5JSH3 913 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms