RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 OLR1P78380 273 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 SULT2A1Q06520 285 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ZNF252P-AS1Q0IIN9 211 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CDC20Q12834 499 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 SQLEQ14534 574 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 SLC39A14Q15043 492 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 FSCBQ5H9T9 825 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 VARS2Q5ST30 1063 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 C6orf183Q5T699 404 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CXorf57Q6NSI4 855 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ST13P5Q8NFI4 369 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 NKX2-3Q8TAU0 364 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 URGCPQ8TCY9 931 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 PTP4A1Q93096 173 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CINPQ9BW66 212 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 ZNF518BQ9C0D4 1074 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 TAS2R7Q9NYW3 318 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 LARSQ9P2J5 1176 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 ANGPTL2Q9UKU9 493 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 PHLPP2Q6ZVD8 1323 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 A6NHS1 94 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 LIN7AO14910 233 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 MAPK3P27361 379 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 AK2P54819 239 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ALDH18A1P54886 795 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 MTTPP55157 894 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 PPP2R2AP63151 447 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 TPM4P67936 248 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 HTD2P86397 168 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 SPAG1Q07617 926 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 AAK1Q2M2I8 961 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ZMYM1Q5SVZ6 1142 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CLVS2Q5SYC1 327 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 DEPDC1Q5TB30 811 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 GPR139Q6DWJ6 353 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 IL27RAQ6UWB1 636 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 KDM7AQ6ZMT4 941 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CATSPERGQ6ZRH7 1159 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 VASH1Q7L8A9 365 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 KRT74Q7RTS7 529 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 VPS36Q86VN1 386 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 VSIG10LQ86VR7 867 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 OR8H3Q8N146 312 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ARL14Q8N4G2 192 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 PCYOX1LQ8NBM8 494 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 LPCAT1Q8NF37 534 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 SLC30A5Q8TAD4 765 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 ABHD17AQ96GS6 310 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 AK8Q96MA6 479 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 TSC22D3Q99576 134 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 COQ7Q99807 217 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 HGH1Q9BTY7 390 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 KIFC3Q9BVG8 833 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 BTBD2Q9BX70 525 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 POLE3Q9NRF9 147 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CREBZFQ9NS37 354 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 C1orf112Q9NSG2 853 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 AKAP7Q9P0M2 348 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 HMG20BQ9P0W2 317 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 EXTL2Q9UBQ6 330 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 GGT7Q9UJ14 662 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 NOD1Q9Y239 953 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 CPDO75976 1380 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CCDC151A5D8V7 595 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 VWA3AA6NCI4 1184 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 H0YIN7 160 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SMAD6O43541 496 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 CHRNA1P02708 482 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CHRNB1P11230 501 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ANXA8P13928 327 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 COL9A1P20849 921 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CNTFP26441 200 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ALDH1A3P47895 512 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PMS1P54277 932 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 DRG2P55039 364 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 NRG1Q02297 640 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 FOXO1Q12778 655 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 COTL1Q14019 142 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 LEXMQ3ZCV2 418 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ANXA8L1Q5VT79 327 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 USPL1Q5W0Q7 1092 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FDX2Q6P4F2 183 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TRIM65Q6PJ69 517 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CCNJLQ8IV13 435 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PALM2Q8IXS6 379 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TRMT44Q8IYL2 757 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 C10orf53Q8N6V4 93 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FAM169BQ8N8A8 192 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 DTX3Q8N9I9 347 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PIK3C3Q8NEB9 887 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 HUS1BQ8NHY5 278 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FAM174AQ8TBP5 190 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CALML6Q8TD86 181 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 MAGEC3Q8TD91 643 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 HCAR2Q8TDS4 363 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SLC5A11Q8WWX8 675 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms