RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 GNA15P30679 374 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CPT1AP50416 773 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 PURAQ00577 322 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 ZNF211Q13398 564 aaPredicted RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 MESDQ14696 234 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 RPS6KA1Q15418 735 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 AADACL2Q6P093 401 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 ADAT2Q7Z6V5 191 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 IFNLR1Q8IU57 520 aaPredicted RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 GPR161Q8N6U8 529 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 WNT8BQ93098 351 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 IMPG2Q9BZV3 1241 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 RBM12Q9NTZ6 932 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 RNF186Q9NXI6 227 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 NRCAMQ92823 1304 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 SCN1AP35498 2009 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 A0A1B0GUA9 196 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 HAS3O00219 553 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 PPEF2O14830 753 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 THAP12O43422 761 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 RTN2O75298 545 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 TNNC2P02585 160 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CTSHP09668 335 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 MCF2P10911 925 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CYBAP13498 195 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 AKR1A1P14550 325 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 TCP1P17987 556 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 AKAP5P24588 427 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CDR1P51861 262 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 FCGRTP55899 365 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 GPC5P78333 572 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 SLC7A5Q01650 507 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 ENPEPQ07075 957 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 TUBB2AQ13885 445 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 FAM187BQ17R55 369 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CLEC16AQ2KHT3 1053 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 WDR72Q3MJ13 1102 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 FAM47CQ5HY64 1035 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 NT5DC3Q86UY8 548 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 SPATA4Q8NEY3 305 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 ANKRD36BP1Q96IX9 119 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CAPNS2Q96L46 248 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 ZMAT2Q96NC0 199 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 C11orf70Q9BRQ4 267 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 TUBB2BQ9BVA1 445 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 NUP85Q9BW27 656 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 OSBPL7Q9BZF2 842 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 SDCBP2Q9H190 292 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 NXF3Q9H4D5 531 aaKnown RBP6.67□□□□□ -1.34
CLK1-210ENST00000473565 SMYD3Q9H7B4 428 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 CISHQ9NSE2 258 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 HMGXB4Q9UGU5 601 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 INTUQ9ULD6 942 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 DAAM1Q9Y4D1 1078 aa6.67□□□□□ -1.34
CLK1-210ENST00000473565 LAMA2P24043 3122 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 MBLAC1A4D2B0 266 aaPredicted RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 RRN3P2A6NIE6 340 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 CEP104O60308 925 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 B4GALT4O60513 344 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 TRPA1O75762 1119 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 POLR2BP30876 1174 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 ASPAP45381 313 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 ADAM17P78536 824 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 CKAP4Q07065 602 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 ENOSF1Q7L5Y1 443 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 SLFN11Q7Z7L1 901 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 FMNL3Q8IVF7 1028 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 C7orf31Q8N865 590 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 KRT35Q92764 455 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 VTI1AQ96AJ9 217 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 GDAP1L1Q96MZ0 367 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 TWNKQ96RR1 684 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 LRRC1Q9BTT6 524 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 AP1M1Q9BXS5 423 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 GCOM2Q9BZD3 368 aaPredicted RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 NIF3L1Q9GZT8 377 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 RNF39Q9H2S5 420 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 CNOT8Q9UFF9 292 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 PIN4Q9Y237 131 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 STXBP5LQ9Y2K9 1186 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 PCDHB2Q9Y5E7 798 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 C17orf102A2RUQ5 167 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 UNGP13051 313 aaPredicted RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 DARSP14868 501 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 RRM1P23921 792 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 POU5F1BQ06416 359 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 SGSM1Q2NKQ1 1148 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 DCAF12L1Q5VU92 463 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 ACAD10Q6JQN1 1059 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 DPH6Q7L8W6 267 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 ZNF410Q86VK4 478 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 UBR7Q8N806 425 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 ALG3Q92685 438 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 TAF4BQ92750 862 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 C18orf25Q96B23 403 aaPredicted RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 TUBGCP4Q9UGJ1 667 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms