RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 DNAJB1P25685 340 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 PNPLA4P41247 253 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 MARSP56192 900 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 CXorf38Q8TB03 319 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 HASPINQ8TF76 798 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 ZNF560Q96MR9 790 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 GUCD1Q96NT3 240 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 POP1Q99575 1024 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 CDX2Q99626 313 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 ZBP1Q9H171 429 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 ARMCX3Q9UH62 379 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 NUB1Q9Y5A7 615 aa20.5■□□□□ 0.87
CTDSP1-207ENST00000473420 TULP1O00294 542 aaPredicted RBP20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 FSCN2O14926 492 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 STX10O60499 249 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 ITGB3P05106 788 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 CCDC192P0DO97 292 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 GTF2H1P32780 548 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 AARSP49588 968 aaKnown RBP eCLIP20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 DLG4P78352 724 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 CAMK1Q14012 370 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 BMS1Q14692 1282 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 CCDC40Q4G0X9 1142 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 C1orf220Q5T0J3 134 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 TRAPPC11Q7Z392 1133 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 GPR65Q8IYL9 337 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 LRRC52Q8N7C0 313 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 ZNF516Q92618 1163 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 GPR62Q9BZJ7 368 aa20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 NGRNQ9NPE2 291 aaKnown RBP20.49■□□□□ 0.87
CTDSP1-207ENST00000473420 TSC2P49815 1807 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 SYCE3A1L190 88 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 PPEF2O14830 753 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 CTSAP10619 480 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 POLR2BP30876 1174 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 TAF6P49848 677 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 RBP5P82980 135 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 ADGRE1Q14246 886 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 TPD52L1Q16890 204 aaPredicted RBP20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 USP41Q3LFD5 358 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 C11orf57Q6ZUT1 292 aaPredicted RBP20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 TMEM130Q8N3G9 435 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 ENOX1Q8TC92 643 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 SUSD3Q96L08 255 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 FUCA2Q9BTY2 467 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 THAP9Q9H5L6 903 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 CHST7Q9NS84 486 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 SIX4Q9UIU6 781 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 SSX2IPQ9Y2D8 614 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 R3HCC1Q9Y3T6 440 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 IRAK3Q9Y616 596 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 MTCH2Q9Y6C9 303 aa20.48■□□□□ 0.87
CTDSP1-207ENST00000473420 C4BPAP04003 597 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 GLUD2P49448 558 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 LILRA4P59901 499 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 ERVFC1P60507 584 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 ZSCAN23Q3MJ62 389 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 ZACNQ401N2 412 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 SV2CQ496J9 727 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 TIGD5Q53EQ6 642 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 C15orf39Q6ZRI6 1047 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 TMC7Q7Z402 723 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 MYLIPQ8WY64 445 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 FAM84AQ96KN4 292 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 TCF25Q9BQ70 676 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 NAT10Q9H0A0 1025 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 DNAJC25Q9H1X3 360 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 ENTPD7Q9NQZ7 604 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 AGAP1Q9UPQ3 857 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 SZT2Q5T011 3432 aa20.47■□□□□ 0.87
CTDSP1-207ENST00000473420 CDH23Q9H251 3354 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 ARHGEF37A1IGU5 675 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 M0QZQ0 153 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 SYN3O14994 580 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 URODP06132 367 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 KRT19P08727 400 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 TRIM49P0CI25 452 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 TRIM49CP0CI26 452 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 FGFR3P22607 806 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 IGFBP6P24592 240 aaPredicted RBP20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 BRCC3P46736 316 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 DSG1Q02413 1049 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 SMC1AQ14683 1233 aaKnown RBP20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 TDRD10Q5VZ19 366 aaKnown RBP20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 PDXDC1Q6P996 788 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 FAM114A1Q8IWE2 563 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 SLC35C1Q96A29 364 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 BPIFA3Q9BQP9 254 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 TMEM8AQ9HCN3 771 aa20.46■□□□□ 0.87
CTDSP1-207ENST00000473420 PHACTR2O75167 634 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 STAU1O95793 577 aaKnown RBP20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 ATICP31939 592 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 IRS1P35568 1242 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 CREMQ03060 361 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 PPP3CAQ08209 521 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 MYO1EQ12965 1108 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 BIRC3Q13489 604 aa20.45■□□□□ 0.86
CTDSP1-207ENST00000473420 ANO6Q4KMQ2 910 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms