RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CACNA1HO95180 2353 aa16.66■□□□□ 0.26
VTI1A-203ENST00000472892 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 A0A0B4J269 797 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 LACTBL1A8MY62 500 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 PROB1E7EW31 1015 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 K7ENM7 598 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 M0QZQ0 153 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 HNRNPDLO14979 420 aaKnown RBP16.65■□□□□ 0.26
VTI1A-203ENST00000472892 OGTO15294 1046 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 PTPN2P17706 415 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 SYT1P21579 422 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 ELF1P32519 619 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 ABCD1P33897 745 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 MCM4P33991 863 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 SPAG1Q07617 926 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 ENOX2Q16206 610 aaKnown RBP16.65■□□□□ 0.26
VTI1A-203ENST00000472892 CTXN3Q4LDR2 81 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 USP49Q70CQ1 688 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 MTSS1LQ765P7 747 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 CCDC105Q8IYK2 499 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 INTS4Q96HW7 963 aaKnown RBP16.65■□□□□ 0.26
VTI1A-203ENST00000472892 ST6GALNAC4Q9H4F1 302 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
VTI1A-203ENST00000472892 CA14Q9ULX7 337 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 MAFFQ9ULX9 164 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 SRPRBQ9Y5M8 271 aaKnown RBP16.65■□□□□ 0.26
VTI1A-203ENST00000472892 MYH11P35749 1972 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 CITO14578 2027 aa16.65■□□□□ 0.26
VTI1A-203ENST00000472892 USP34Q70CQ2 3546 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 TBCAO75347 108 aaKnown RBP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 OAZ2O95190 189 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 SEC24AO95486 1093 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 RHOP08100 348 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 MARCKSP29966 332 aaPredicted RBP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 NMT1P30419 496 aaKnown RBP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 ARPP19P56211 112 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 GPC5P78333 572 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 PPP2R3AQ06190 1150 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 RESTQ13127 1097 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 SPECC1Q5M775 1068 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 ZBTB41Q5SVQ8 909 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 ZNF280DQ6N043 979 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 PHLDB3Q6NSJ2 640 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 SLC39A4Q6P5W5 647 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 MAP4K3Q8IVH8 894 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 CD302Q8IX05 232 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 NPAS3Q8IXF0 933 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 TMEM130Q8N3G9 435 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 RPF1Q9H9Y2 349 aaKnown RBP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 CYP4F11Q9HBI6 524 aa16.64■□□□□ 0.25
VTI1A-203ENST00000472892 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 MRPS23Q9Y3D9 190 aaKnown RBP16.64■□□□□ 0.25
VTI1A-203ENST00000472892 PRRG1O14668 218 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 XPOTO43592 962 aaKnown RBP16.63■□□□□ 0.25
VTI1A-203ENST00000472892 LRG1P02750 347 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 NBL1P41271 181 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 SLC5A9Q2M3M2 681 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 KRI1Q8N9T8 703 aaKnown RBP16.63■□□□□ 0.25
VTI1A-203ENST00000472892 DTWD2Q8NBA8 298 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 MSTO1Q9BUK6 570 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 OXCT2Q9BYC2 517 aaPredicted RBP16.63■□□□□ 0.25
VTI1A-203ENST00000472892 BACH2Q9BYV9 841 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 TBC1D17Q9HA65 648 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 ARHGEF3Q9NR81 526 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 GDE1Q9NZC3 331 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 AFF4Q9UHB7 1163 aaKnown RBP16.63■□□□□ 0.25
VTI1A-203ENST00000472892 STYXL1Q9Y6J8 313 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 NOTCH4Q99466 2003 aa16.63■□□□□ 0.25
VTI1A-203ENST00000472892 ANKRD63C9JTQ0 380 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 STK25O00506 426 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 MICAL2O94851 1124 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 STARD6P59095 220 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 YWHAHQ04917 246 aaPredicted RBP16.62■□□□□ 0.25
VTI1A-203ENST00000472892 ZC2HC1CQ53FD0 456 aaPredicted RBP16.62■□□□□ 0.25
VTI1A-203ENST00000472892 PRSS36Q5K4E3 855 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 SPATA1Q5VX52 437 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 FAM173BQ6P4H8 233 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 ZNF720Q7Z2F6 126 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 BEST2Q8NFU1 509 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 STK17AQ9UEE5 414 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 INSL5Q9Y5Q6 135 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 MORC2Q9Y6X9 1032 aaPredicted RBP16.62■□□□□ 0.25
VTI1A-203ENST00000472892 MYO15AQ9UKN7 3530 aa16.62■□□□□ 0.25
VTI1A-203ENST00000472892 ECI2O75521 394 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 POU5F1Q01860 360 aaKnown RBP16.61■□□□□ 0.25
VTI1A-203ENST00000472892 ADCY1Q08828 1119 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 RRAGBQ5VZM2 374 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 SLFN12LQ6IEE8 588 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 RNF19BQ6ZMZ0 732 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 ING5Q8WYH8 240 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 MCRS1Q96EZ8 462 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 CORO1BQ9BR76 489 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 MTMR6Q9Y217 621 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms