RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 BECN1Q14457 450 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 ZBTB41Q5SVQ8 909 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 JADE1Q6IE81 842 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 CEP57L1Q8IYX8 460 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 PCDHB8Q9UN66 801 aa21.1■□□□□ 0.97
COMMD1-208ENST00000472729 CCL16O15467 120 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 POLR2DO15514 142 aaKnown RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 ADAM12O43184 909 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 ASGR2P07307 311 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 FSHRP23945 695 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 IGFBP6P24592 240 aaPredicted RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 HOXA9P31269 272 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 POU5F1Q01860 360 aaKnown RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 YWHAHQ04917 246 aaPredicted RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 SLC39A4Q6P5W5 647 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 SHC4Q6S5L8 630 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 CD300LGQ6UXG3 332 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 HFE2Q6ZVN8 426 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 GET4Q7L5D6 327 aaPredicted RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 ZNF461Q8TAF7 563 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 ZNF707Q96C28 371 aaPredicted RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 OXCT2Q9BYC2 517 aaPredicted RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 PCDHA7Q9UN72 937 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 R3HCC1Q9Y3T6 440 aaKnown RBP21.09■□□□□ 0.97
COMMD1-208ENST00000472729 STYXL1Q9Y6J8 313 aa21.09■□□□□ 0.97
COMMD1-208ENST00000472729 MEFVO15553 781 aaPredicted RBP21.08■□□□□ 0.97
COMMD1-208ENST00000472729 IL18RAPO95256 599 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 LRG1P02750 347 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 CPB1P15086 417 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 KRT85P78386 507 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 PKP1Q13835 747 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 ZBTB6Q15916 424 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 SPATA1Q5VX52 437 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 SLC8B1Q6J4K2 584 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 GRASPQ7Z6J2 395 aaPredicted RBP21.08■□□□□ 0.97
COMMD1-208ENST00000472729 ELMOD1Q8N336 334 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 FAM213AQ9BRX8 229 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 CYP4F11Q9HBI6 524 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 IGSF9Q9P2J2 1179 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 C2CD2Q9Y426 696 aa21.08■□□□□ 0.97
COMMD1-208ENST00000472729 TDRD15B5MCY1 1934 aaKnown RBP21.08■□□□□ 0.96
COMMD1-208ENST00000472729 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.07■□□□□ 0.96
COMMD1-208ENST00000472729 FRMD3A2A2Y4 597 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 TISP43B9A030 160 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 FAM189A1O60320 539 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 ROR1Q01973 937 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 TDGQ13569 410 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 TPGS2Q68CL5 300 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 ARMCX5Q6P1M9 558 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 CACTINQ8WUQ7 758 aaKnown RBP21.07■□□□□ 0.96
COMMD1-208ENST00000472729 TRIM9Q9C026 710 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 KBTBD4Q9NVX7 518 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 FBXL5Q9UKA1 691 aa21.07■□□□□ 0.96
COMMD1-208ENST00000472729 PPP1R37O75864 691 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 PRPF6O94906 941 aaKnown RBP21.06■□□□□ 0.96
COMMD1-208ENST00000472729 ADRB2P07550 413 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 NFICP08651 508 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 ODC1P11926 461 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 GARTP22102 1010 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 GUCY2FP51841 1108 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 KCNA1Q09470 495 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 E2F4Q16254 413 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 METTL23Q86XA0 190 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 SPATA32Q96LK8 384 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 STRA6Q9BX79 667 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 MFSD1Q9H3U5 465 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 KCNK12Q9HB15 430 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 DPP3Q9NY33 737 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 RBAKQ9NYW8 714 aaPredicted RBP21.06■□□□□ 0.96
COMMD1-208ENST00000472729 RAPGEFL1Q9UHV5 662 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 RCOR1Q9UKL0 485 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 FBXL21Q9UKT6 434 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 KCNH3Q9ULD8 1083 aa21.06■□□□□ 0.96
COMMD1-208ENST00000472729 ZFP37Q9Y6Q3 630 aaPredicted RBP21.06■□□□□ 0.96
COMMD1-208ENST00000472729 M0QZQ0 153 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 KIAA0391O15091 583 aaKnown RBP21.05■□□□□ 0.96
COMMD1-208ENST00000472729 ATF2P15336 505 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 CASP5P51878 434 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 C9orf57Q5W0N0 161 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 RESP18Q5W5W9 173 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 IQCEQ6IPM2 695 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 RSPO2Q6UXX9 243 aaPredicted RBP21.05■□□□□ 0.96
COMMD1-208ENST00000472729 BMP8AQ7Z5Y6 402 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 NT5DC4Q86YG4 428 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 FEZF2Q8TBJ5 459 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 NXPE3Q969Y0 559 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 FAM122AQ96E09 287 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 SAAL1Q96ER3 474 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 MAFFQ9ULX9 164 aa21.05■□□□□ 0.96
COMMD1-208ENST00000472729 ARIH1Q9Y4X5 557 aaPredicted RBP21.05■□□□□ 0.96
COMMD1-208ENST00000472729 TIMM13Q9Y5L4 95 aaPredicted RBP21.05■□□□□ 0.96
COMMD1-208ENST00000472729 EXTL3O43909 919 aa21.04■□□□□ 0.96
COMMD1-208ENST00000472729 ADSSP30520 456 aa21.04■□□□□ 0.96
COMMD1-208ENST00000472729 LILRA4P59901 499 aa21.04■□□□□ 0.96
COMMD1-208ENST00000472729 TFAMQ00059 246 aaKnown RBP21.04■□□□□ 0.96
COMMD1-208ENST00000472729 MRPL58Q14197 206 aaKnown RBP21.04■□□□□ 0.96
COMMD1-208ENST00000472729 PABPC1LQ4VXU2 614 aaKnown RBP21.04■□□□□ 0.96
COMMD1-208ENST00000472729 FAM26FQ5R3K3 315 aa21.04■□□□□ 0.96
COMMD1-208ENST00000472729 OVOS1Q6IE37 1185 aa21.04■□□□□ 0.96
COMMD1-208ENST00000472729 C7orf25Q9BPX7 421 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms