RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 NELFCDQ8IXH7 590 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 SLC39A7Q92504 469 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 SAAL1Q96ER3 474 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 CDCA3Q99618 268 aaPredicted RBP12.91□□□□□ -0.34
CLRN1-205ENST00000472224 STRA6Q9BX79 667 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 SMOC2Q9H3U7 446 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 SLC39A2Q9NP94 309 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 MRPL17Q9NRX2 175 aaKnown RBP12.91□□□□□ -0.34
CLRN1-205ENST00000472224 CHMP5Q9NZZ3 219 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 STK39Q9UEW8 545 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 TUBGCP4Q9UGJ1 667 aa12.91□□□□□ -0.34
CLRN1-205ENST00000472224 AGO2Q9UKV8 859 aaKnown RBP12.91□□□□□ -0.34
CLRN1-205ENST00000472224 CFAP47Q6ZTR5 3102 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 PODXLO00592 558 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 EIF3DO15371 548 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLRN1-205ENST00000472224 ZNF202O95125 648 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 C7P10643 843 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 KCNE1P15382 129 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 GLUD2P49448 558 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 CLCNKBP51801 687 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 POSTNQ15063 836 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 PTPN14Q15678 1187 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 NAB2Q15742 525 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
CLRN1-205ENST00000472224 ALKAL1Q6UXT8 129 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 TMEM130Q8N3G9 435 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 MRPL43Q8N983 215 aaKnown RBP12.9□□□□□ -0.34
CLRN1-205ENST00000472224 UROC1Q96N76 676 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 CBWD1Q9BRT8 395 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 APOL5Q9BWW9 433 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 EMILIN2Q9BXX0 1053 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 GPR62Q9BZJ7 368 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 PCIF1Q9H4Z3 704 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 TMEM206Q9H813 350 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 NCOR2Q9Y618 2525 aa12.9□□□□□ -0.34
CLRN1-205ENST00000472224 SCN1AP35498 2009 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 UBE4BO95155 1302 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 FAM237AA0A1B0GTK4 181 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 TTC26A0AVF1 554 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 FAM189A1O60320 539 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 CLASP2O75122 1294 aaKnown RBP12.89□□□□□ -0.35
CLRN1-205ENST00000472224 NFICP08651 508 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 SP100P23497 879 aaPredicted RBP12.89□□□□□ -0.35
CLRN1-205ENST00000472224 KLRC2P26717 231 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 ADSSP30520 456 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 FAM171A1Q5VUB5 890 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 JADE1Q6IE81 842 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 KRBA2Q6ZNG9 492 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 GLYCTKQ8IVS8 523 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 KREMEN2Q8NCW0 462 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 RIN2Q8WYP3 895 aaPredicted RBP12.89□□□□□ -0.35
CLRN1-205ENST00000472224 CCDC47Q96A33 483 aaKnown RBP12.89□□□□□ -0.35
CLRN1-205ENST00000472224 CCDC34Q96HJ3 373 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 PLEKHA5Q9HAU0 1116 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 CPSF3Q9UKF6 684 aaKnown RBP12.89□□□□□ -0.35
CLRN1-205ENST00000472224 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 STYXL1Q9Y6J8 313 aa12.89□□□□□ -0.35
CLRN1-205ENST00000472224 MTCL1Q9Y4B5 1905 aaKnown RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 I3L4J1 428 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 XPOTO43592 962 aaKnown RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 KLRC4O43908 158 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 GARTP22102 1010 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 MCM4P33991 863 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 BRCC3P46736 316 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 UPP1Q16831 310 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 PRSS55Q6UWB4 352 aaPredicted RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 EPM2AIP1Q7L775 607 aaPredicted RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 C3orf58Q8NDZ4 430 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 CNTNAP3Q9BZ76 1288 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 S1PR5Q9H228 398 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 RBAKQ9NYW8 714 aaPredicted RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
CLRN1-205ENST00000472224 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 HCFC2Q9Y5Z7 792 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 MYO10Q9HD67 2058 aa12.88□□□□□ -0.35
CLRN1-205ENST00000472224 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 MYL1P05976 194 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 ADH1AP07327 375 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
CLRN1-205ENST00000472224 EPCAMP16422 314 aa12.87□□□□□ -0.35
CLRN1-205ENST00000472224 RPL17P18621 184 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms