RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 EXOC3L4Q17RC7 722 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 C1orf220Q5T0J3 134 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 HPDLQ96IR7 371 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 TRIM5Q9C035 493 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 GOLGA2P5Q9HBQ8 144 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 PTPRSQ13332 1948 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 NRP1O14786 923 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 GUCY2FP51841 1108 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 TNNC1P63316 161 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 KRT17Q04695 432 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 SOX4Q06945 474 aaPredicted RBP18.14■□□□□ 0.49
CCM2-205ENST00000472223 ZNF699Q32M78 642 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 CBWD6Q4V339 395 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 CBWD3Q5JTY5 395 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 MIIPQ5JXC2 388 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 CBWD5Q5RIA9 395 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 KCNT2Q6UVM3 1135 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 DSTYKQ6XUX3 929 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 C15orf39Q6ZRI6 1047 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
CCM2-205ENST00000472223 TMEM169Q96HH4 297 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 FAM81BQ96LP2 452 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 SAMD11Q96NU1 681 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 CWH43Q9H720 699 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 RC3H2Q9HBD1 1191 aaKnown RBP18.14■□□□□ 0.49
CCM2-205ENST00000472223 IFNKQ9P0W0 207 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 GCNT4Q9P109 453 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 DNAJB4Q9UDY4 337 aa18.14■□□□□ 0.49
CCM2-205ENST00000472223 PRG3Q9Y2Y8 225 aaPredicted RBP18.14■□□□□ 0.49
CCM2-205ENST00000472223 MRPL42Q9Y6G3 142 aaKnown RBP18.14■□□□□ 0.49
CCM2-205ENST00000472223 TNRC18O15417 2968 aaPredicted RBP18.14■□□□□ 0.49
CCM2-205ENST00000472223 ANO9A1A5B4 782 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 GRXCR1A8MXD5 290 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 PIRO00625 290 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 CST3P01034 146 aaPredicted RBP18.13■□□□□ 0.49
CCM2-205ENST00000472223 GALTP07902 379 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 MYL6P60660 151 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 ELAVL2Q12926 359 aaKnown RBP18.13■□□□□ 0.49
CCM2-205ENST00000472223 BMS1Q14692 1282 aaKnown RBP18.13■□□□□ 0.49
CCM2-205ENST00000472223 NAB2Q15742 525 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 ZNF667Q5HYK9 610 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 EHBP1Q8NDI1 1231 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 TAS1R2Q8TE23 839 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 ANP32BQ92688 251 aaKnown RBP18.13■□□□□ 0.49
CCM2-205ENST00000472223 NT5C1BQ96P26 610 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 DNAI2Q9GZS0 605 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 SLC28A3Q9HAS3 691 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 RTN4Q9NQC3 1192 aaKnown RBP18.13■□□□□ 0.49
CCM2-205ENST00000472223 SPG21Q9NZD8 308 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 COQ4Q9Y3A0 265 aa18.13■□□□□ 0.49
CCM2-205ENST00000472223 A0A1B0GTH6 734 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 KPNA7A9QM74 516 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 SLC11A1P49279 550 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 GSE1Q14687 1217 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 WDR72Q3MJ13 1102 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 PRPF38BQ5VTL8 546 aaKnown RBP18.12■□□□□ 0.49
CCM2-205ENST00000472223 COLGALT1Q8NBJ5 622 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 MMS19Q96T76 1030 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 CRACR2AQ9BSW2 395 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 PUF60Q9UHX1 559 aaKnown RBP18.12■□□□□ 0.49
CCM2-205ENST00000472223 SIX4Q9UIU6 781 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 ADAM28Q9UKQ2 775 aa18.12■□□□□ 0.49
CCM2-205ENST00000472223 TMEM189-UBE2V1I3L0A0 370 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 HUS1O60921 280 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 STAU1O95793 577 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 CA3P07451 260 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 TRIM21P19474 475 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 CTNNB1P35222 781 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 LILRA4P59901 499 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 SMAD3P84022 425 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 NR1I3Q14994 352 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 EPC2Q52LR7 807 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 SARM1Q6SZW1 724 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 METTL23Q86XA0 190 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 RABGGTAQ92696 567 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 CLP1Q92989 425 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 FAXDC2Q96IV6 333 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 TGS1Q96RS0 853 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 PLVAPQ9BX97 442 aa18.11■□□□□ 0.49
CCM2-205ENST00000472223 INTS2Q9H0H0 1204 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 NXF1Q9UBU9 619 aaKnown RBP18.11■□□□□ 0.49
CCM2-205ENST00000472223 SF3B1O75533 1304 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■■■ 133.7
CCM2-205ENST00000472223 LINC01553A4QN01 128 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 NT5C1B-RDH14C9J2C7 533 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 KIF4AO95239 1232 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 VNN1O95497 513 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 RB1P06400 928 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 TBXAS1P24557 533 aaPredicted RBP18.1■□□□□ 0.49
CCM2-205ENST00000472223 BMPR1AP36894 532 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 YWHAEP62258 255 aaKnown RBP18.1■□□□□ 0.49
CCM2-205ENST00000472223 NOP14P78316 857 aaKnown RBP18.1■□□□□ 0.49
CCM2-205ENST00000472223 PPP2R2DQ66LE6 453 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 FAM109BQ6ICB4 259 aaPredicted RBP18.1■□□□□ 0.49
CCM2-205ENST00000472223 NEK11Q8NG66 645 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 HASPINQ8TF76 798 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 FAM84AQ96KN4 292 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 NAP1L5Q96NT1 182 aaPredicted RBP18.1■□□□□ 0.49
CCM2-205ENST00000472223 PAAF1Q9BRP4 392 aa18.1■□□□□ 0.49
CCM2-205ENST00000472223 PBX4Q9BYU1 374 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms