RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 TMC7Q7Z402 723 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 FRMD5Q7Z6J6 570 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 USP37Q86T82 979 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 TLR9Q9NR96 1032 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 MTCH2Q9Y6C9 303 aa13.31□□□□□ -0.28
PRKCB-205ENST00000472066 SF3B1O75533 1304 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKCB-205ENST00000472066 SYCE3A1L190 88 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 I3L4J1 428 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 FSCN2O14926 492 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 SPTLC1O15269 473 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 CXCL14O95715 111 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 SOD2P04179 222 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 KRT19P08727 400 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 CTSAP10619 480 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 PAX3P23760 479 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 IRS1P35568 1242 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 LILRA4P59901 499 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 RBP5P82980 135 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 ELAVL2Q12926 359 aaKnown RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 USP41Q3LFD5 358 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 TIGD5Q53EQ6 642 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 PDE12Q6L8Q7 609 aaKnown RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 HERC2P3Q9BVR0 1158 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 METTL14Q9HCE5 456 aaKnown RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
PRKCB-205ENST00000472066 ARMCX3Q9UH62 379 aaPredicted RBP13.3□□□□□ -0.28
PRKCB-205ENST00000472066 CSPG5O95196 566 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 GNA14O95837 355 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 TRIM49P0CI25 452 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 TRIM49CP0CI26 452 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 CCDC192P0DO97 292 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 FGFR3P22607 806 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 GTF2H1P32780 548 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 PNPLA4P41247 253 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 AARSP49588 968 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 PPP3CAQ08209 521 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 BMS1Q14692 1282 aaKnown RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 TPD52L1Q16890 204 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 ZSCAN23Q3MJ62 389 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 CCDC40Q4G0X9 1142 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 FAM171A1Q5VUB5 890 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 KIAA0319Q5VV43 1072 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 ENOX1Q8TC92 643 aaKnown RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 B3GALT6Q96L58 329 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 FUCA2Q9BTY2 467 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 DNAJC25Q9H1X3 360 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 THAP9Q9H5L6 903 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 NGRNQ9NPE2 291 aaKnown RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 ENTPD7Q9NQZ7 604 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
PRKCB-205ENST00000472066 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
PRKCB-205ENST00000472066 KPNA7A9QM74 516 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 M0QZQ0 153 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 STX10O60499 249 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 LILRB3O75022 631 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 PHACTR2O75167 634 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 FOSL2P15408 326 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 GCLMP48507 274 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 GLUD2P49448 558 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 TAF6P49848 677 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 DSG1Q02413 1049 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 BIRC3Q13489 604 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 SMC1AQ14683 1233 aaKnown RBP13.28□□□□□ -0.28
PRKCB-205ENST00000472066 ZACNQ401N2 412 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 RTP2Q5QGT7 225 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 TDRD10Q5VZ19 366 aaKnown RBP13.28□□□□□ -0.28
PRKCB-205ENST00000472066 PLPP4Q5VZY2 271 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-205ENST00000472066 C15orf39Q6ZRI6 1047 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 CEP57Q86XR8 500 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 AUTS2Q8WXX7 1259 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 SENP8Q96LD8 212 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 MRPL17Q9NRX2 175 aaKnown RBP13.28□□□□□ -0.28
PRKCB-205ENST00000472066 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 SSX2IPQ9Y2D8 614 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 IRAK3Q9Y616 596 aa13.28□□□□□ -0.28
PRKCB-205ENST00000472066 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.28
PRKCB-205ENST00000472066 C2orf71A6NGG8 1288 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms