RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RBM10P98175 930 aaKnown RBP21.37■■□□□ 1.01
HDAC7-220ENST00000471235 ADAM15Q13444 863 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 MYBPC2Q14324 1141 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 SURF1Q15526 300 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 LMBRD2Q68DH5 695 aaPredicted RBP21.37■■□□□ 1.01
HDAC7-220ENST00000471235 PRSS55Q6UWB4 352 aaPredicted RBP21.37■■□□□ 1.01
HDAC7-220ENST00000471235 ADSSL1Q8N142 457 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 GPT2Q8TD30 523 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 PIK3R5Q8WYR1 880 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 HLA-CQ95604 372 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 KLHL5Q96PQ7 755 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 MTMR12Q9C0I1 747 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 GZF1Q9H116 711 aaPredicted RBP21.37■■□□□ 1.01
HDAC7-220ENST00000471235 COG5Q9UP83 839 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 DENND4AQ7Z401 1863 aa21.37■■□□□ 1.01
HDAC7-220ENST00000471235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.36■■□□□ 1.01
HDAC7-220ENST00000471235 FSD2A1L4K1 749 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 PIRO00625 290 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 TRAPPC3O43617 180 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 CD44P16070 742 aaKnown RBP21.36■■□□□ 1.01
HDAC7-220ENST00000471235 NR2F2P24468 414 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 LTBRP36941 435 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 AARSP49588 968 aaKnown RBP eCLIP21.36■■□□□ 1.01
HDAC7-220ENST00000471235 KCNC3Q14003 757 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 CEP57Q86XR8 500 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 GPR65Q8IYL9 337 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 C1orf127Q8N9H9 656 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 OR5B17Q8NGF7 314 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 PLEKHO2Q8TD55 490 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 CACTINQ8WUQ7 758 aaKnown RBP21.36■■□□□ 1.01
HDAC7-220ENST00000471235 SUSD3Q96L08 255 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 MFSD14AQ96MC6 490 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 CGRRF1Q99675 332 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 EMILIN2Q9BXX0 1053 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 RXFP1Q9HBX9 757 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 INTS13Q9NVM9 706 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 KIAA1468Q9P260 1216 aa21.36■■□□□ 1.01
HDAC7-220ENST00000471235 TMEM191BP0C7N4 346 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 DLX2Q07687 328 aaPredicted RBP21.35■■□□□ 1.01
HDAC7-220ENST00000471235 PSMD5Q16401 504 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 EDRF1Q3B7T1 1238 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 CEP135Q66GS9 1140 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 CENPPQ6IPU0 288 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 LLGL2Q6P1M3 1020 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 EP400NLQ6ZTU2 488 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 WDR49Q8IV35 697 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 CCDC127Q96BQ5 260 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 NUP62CLQ9H1M0 184 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.35■■□□□ 1.01
HDAC7-220ENST00000471235 BARX2Q9UMQ3 279 aaPredicted RBP21.35■■□□□ 1.01
HDAC7-220ENST00000471235 PCDHB8Q9UN66 801 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 HCFC2Q9Y5Z7 792 aa21.35■■□□□ 1.01
HDAC7-220ENST00000471235 SPTLC1O15269 473 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 TEX28O15482 410 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 ITGB3P05106 788 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 DLATP10515 647 aaKnown RBP21.34■■□□□ 1.01
HDAC7-220ENST00000471235 RPL17P18621 184 aaKnown RBP21.34■■□□□ 1.01
HDAC7-220ENST00000471235 KCNA5P22460 613 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 POLR2BP30876 1174 aaKnown RBP21.34■■□□□ 1.01
HDAC7-220ENST00000471235 NDUFV1P49821 464 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 PMS1P54277 932 aaKnown RBP21.34■■□□□ 1.01
HDAC7-220ENST00000471235 CREMQ03060 361 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 TFF2Q03403 129 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 STIM1Q13586 685 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 TRIML1Q8N9V2 468 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 CXorf38Q8TB03 319 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 LNX1Q8TBB1 728 aaPredicted RBP21.34■■□□□ 1.01
HDAC7-220ENST00000471235 SLC22A17Q8WUG5 538 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 ANKRD36BP1Q96IX9 119 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 FNBP1Q96RU3 617 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 FNIP2Q9P278 1114 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 ITGA11Q9UKX5 1188 aa21.34■■□□□ 1.01
HDAC7-220ENST00000471235 TRIM49BA6NDI0 452 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 M0QZQ0 153 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 PSMA7O14818 248 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 SYN3O14994 580 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 TNNC2P02585 160 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 ADH1AP07327 375 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 EPCAMP16422 314 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 PPP1R2P41236 205 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 TAF6P49848 677 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 LILRA4P59901 499 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 VARS2Q5ST30 1063 aaKnown RBP21.33■■□□□ 1.01
HDAC7-220ENST00000471235 SCARA3Q6AZY7 606 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 PDXDC1Q6P996 788 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.33■■□□□ 1.01
HDAC7-220ENST00000471235 ZNF560Q96MR9 790 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 POP1Q99575 1024 aaKnown RBP21.33■■□□□ 1.01
HDAC7-220ENST00000471235 TSG101Q99816 390 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 CLEC1BQ9P126 229 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 MTRRQ9UBK8 725 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 SIX4Q9UIU6 781 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 FRMD4BQ9Y2L6 1034 aa21.33■■□□□ 1.01
HDAC7-220ENST00000471235 PPP1R3GB7ZBB8 358 aa21.32■■□□□ 1
HDAC7-220ENST00000471235 H3BQ06 376 aaPredicted RBP21.32■■□□□ 1
HDAC7-220ENST00000471235 AKAP3O75969 853 aa21.32■■□□□ 1
HDAC7-220ENST00000471235 CCNE1P24864 410 aa21.32■■□□□ 1
HDAC7-220ENST00000471235 RPL13P26373 211 aaKnown RBP21.32■■□□□ 1
HDAC7-220ENST00000471235 KLRC2P26717 231 aa21.32■■□□□ 1
HDAC7-220ENST00000471235 CLCN4P51793 760 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms