RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 SYN3O14994 580 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 MBTPS2O43462 519 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 ADH1AP07327 375 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 HOXB8P17481 243 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-208ENST00000471226 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
ABCF3-208ENST00000471226 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.22
ABCF3-208ENST00000471226 CREMQ03060 361 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 PSMD5Q16401 504 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 PTCRAQ6ISU1 281 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-208ENST00000471226 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 SYCE2Q6PIF2 218 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 CBWD2Q8IUF1 395 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 XXYLT1Q8NBI6 393 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 SMRP1Q8NCR6 262 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 SUSD3Q96L08 255 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 S1PR5Q9H228 398 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 PDE11AQ9HCR9 933 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 NUB1Q9Y5A7 615 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 VCANP13611 3396 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 C2orf16Q68DN1 1984 aa16.44■□□□□ 0.22
ABCF3-208ENST00000471226 TTC28Q96AY4 2481 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 TSC2P49815 1807 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 PPEF2O14830 753 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 IL9P15248 144 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 PAX3P23760 479 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 UBE2HP62256 183 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 SMAD4Q13485 552 aaKnown RBP16.43■□□□□ 0.22
ABCF3-208ENST00000471226 SURF1Q15526 300 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 CLUL1Q15846 466 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 C9orf57Q5W0N0 161 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 GUF1Q8N442 669 aaKnown RBP16.43■□□□□ 0.22
ABCF3-208ENST00000471226 NOC3LQ8WTT2 800 aaKnown RBP16.43■□□□□ 0.22
ABCF3-208ENST00000471226 GSDMAQ96QA5 445 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 CLSTN3Q9BQT9 956 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 DMAC2Q9NW81 257 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 MTRRQ9UBK8 725 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 PCDHA5Q9Y5H7 936 aa16.43■□□□□ 0.22
ABCF3-208ENST00000471226 M0QZQ0 153 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
ABCF3-208ENST00000471226 KIF20AO95235 890 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 RPL17P18621 184 aaKnown RBP16.42■□□□□ 0.22
ABCF3-208ENST00000471226 MCM4P33991 863 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 CYP2J2P51589 502 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 MRPL58Q14197 206 aaKnown RBP16.42■□□□□ 0.22
ABCF3-208ENST00000471226 SNRNP35Q16560 246 aaKnown RBP16.42■□□□□ 0.22
ABCF3-208ENST00000471226 LILRA6Q6PI73 481 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 ANKS3Q6ZW76 656 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 DZANK1Q9NVP4 752 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
ABCF3-208ENST00000471226 PCDHB8Q9UN66 801 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 TRAF3IP3Q9Y228 551 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 BACE2Q9Y5Z0 518 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 C5orf42Q9H799 3197 aa16.42■□□□□ 0.22
ABCF3-208ENST00000471226 ADAM12O43184 909 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 SMC2O95347 1197 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 GLUD1P00367 558 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 LILRA4P59901 499 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 MYBPC2Q14324 1141 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 SMAD2Q15796 467 aaKnown RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 COBLL1Q53SF7 1204 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 VARS2Q5ST30 1063 aaKnown RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 RSPO2Q6UXX9 243 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 RDH13Q8NBN7 331 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 CXorf38Q8TB03 319 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 HDAC7Q8WUI4 952 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 CACTINQ8WUQ7 758 aaKnown RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 SUSD6Q92537 303 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 COL25A1Q9BXS0 654 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-208ENST00000471226 MAPK8IP1Q9UQF2 711 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 FAM50BQ9Y247 325 aa16.41■□□□□ 0.22
ABCF3-208ENST00000471226 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 DENND4AQ7Z401 1863 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 SPTLC1O15269 473 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 TGM5O43548 720 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 EXOC3O60645 756 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
ABCF3-208ENST00000471226 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 RAB33AQ14088 237 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 PSMD6Q15008 389 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 NFIL3Q16649 462 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 ZNF658Q5TYW1 1059 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-208ENST00000471226 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 GLYCTKQ8IVS8 523 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 C1orf127Q8N9H9 656 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 APPL2Q8NEU8 664 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 ADAMTS19Q8TE59 1207 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 BORCS6Q96GS4 357 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-208ENST00000471226 ADAM7Q9H2U9 754 aa16.4■□□□□ 0.22
ABCF3-208ENST00000471226 INTS13Q9NVM9 706 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms