RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ADPGKQ9BRR6 497 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 FAM213AQ9BRX8 229 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 C17orf80Q9BSJ5 609 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 TARS2Q9BW92 718 aaKnown RBP9.87□□□□□ -0.83
PTPRE-207ENST00000471218 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 IFIH1Q9BYX4 1025 aaKnown RBP9.87□□□□□ -0.83
PTPRE-207ENST00000471218 ADAMTS10Q9H324 1103 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 ASB7Q9H672 318 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 SIX2Q9NPC8 291 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 AGPAT5Q9NUQ2 364 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 RBAKQ9NYW8 714 aaPredicted RBP9.87□□□□□ -0.83
PTPRE-207ENST00000471218 PPP2R2CQ9Y2T4 447 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 DERAQ9Y315 318 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 EPN1Q9Y6I3 576 aaPredicted RBP9.87□□□□□ -0.83
PTPRE-207ENST00000471218 A0A1B0GUA9 196 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 LRRC53A6NM62 1247 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 LRRIQ3A6PVS8 624 aaPredicted RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 ERLIN2O94905 339 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 DARSP14868 501 aaKnown RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 TBXAS1P24557 533 aaPredicted RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 CRYBB1P53674 252 aaPredicted RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 TERF1P54274 439 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 TUBB2AQ13885 445 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 SPA17Q15506 151 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PTPN14Q15678 1187 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 ZNF568Q3ZCX4 644 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 CBWD6Q4V339 395 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 CBWD3Q5JTY5 395 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 FAM26DQ5JW98 314 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 CBWD5Q5RIA9 395 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PPP1R2P3Q6NXS1 205 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 CRELD2Q6UXH1 353 aaPredicted RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 EP400NLQ6ZTU2 488 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PPP1R13LQ8WUF5 828 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 TRAPPC12Q8WVT3 735 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 NLRP7Q8WX94 980 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PPP1R13BQ96KQ4 1090 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 TUBB2BQ9BVA1 445 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 TMEM117Q9H0C3 514 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 IRF2BPLQ9H1B7 796 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PCIF1Q9H4Z3 704 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 HAUS4Q9H6D7 363 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 NHEJ1Q9H9Q4 299 aaPredicted RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PLEKHA5Q9HAU0 1116 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 C11orf16Q9NQ32 467 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 CPSF3Q9UKF6 684 aaKnown RBP9.86□□□□□ -0.83
PTPRE-207ENST00000471218 C2CD2Q9Y426 696 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 PAXBP1Q9Y5B6 917 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 SQORQ9Y6N5 450 aa9.86□□□□□ -0.83
PTPRE-207ENST00000471218 A0A087WZ62 844 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 FAM86C2PA6NEL3 165 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 TISP43B9A030 160 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 F8VZ95 297 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 M0QZ92 97 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 RNF225M0QZC1 329 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 EPHB6O15197 1021 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 GPR32O75388 356 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 UPP2O95045 317 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 TRIM49P0CI25 452 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 TRIM49CP0CI26 452 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 IL9P15248 144 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 EIF4BP23588 611 aaKnown RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 BMPR1AP36894 532 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 MFAP3P55082 362 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 ETF1P62495 437 aaKnown RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 IGBP1P78318 339 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 PPP3CAQ08209 521 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 BMS1Q14692 1282 aaKnown RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 MBTPS1Q14703 1052 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 ASIC2Q16515 512 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 DUOXA2Q1HG44 320 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 ASTE1Q2TB18 679 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 HGSNATQ68CP4 663 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 NOTUMQ6P988 496 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 RAD9BQ6WBX8 426 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 SV2AQ7L0J3 742 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 TMCO2Q7Z6W1 182 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 TTC39CQ8N584 583 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 SAAL1Q96ER3 474 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 SCLT1Q96NL6 688 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 NT5C1BQ96P26 610 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 FDXACB1Q9BRP7 624 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 CRACR2AQ9BSW2 395 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 TCHPQ9BT92 498 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 FTHL17Q9BXU8 183 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 IMPG2Q9BZV3 1241 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 IKZF4Q9H2S9 585 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 DEF6Q9H4E7 631 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 RRAGDQ9NQL2 400 aaPredicted RBP9.85□□□□□ -0.83
PTPRE-207ENST00000471218 SETD4Q9NVD3 440 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 RAB20Q9NX57 234 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 CLDND1Q9NY35 253 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 ANKFY1Q9P2R3 1169 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 INTUQ9ULD6 942 aa9.85□□□□□ -0.83
PTPRE-207ENST00000471218 SOWAHDA6NJG2 315 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 C19orf67A6NJJ6 358 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 BTNL10A8MVZ5 291 aa9.84□□□□□ -0.83
PTPRE-207ENST00000471218 H3BQ06 376 aaPredicted RBP9.84□□□□□ -0.83
PTPRE-207ENST00000471218 TREHO43280 583 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms