RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 GPC1P35052 558 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 PHKA2P46019 1235 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 GPC5P78333 572 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TRIP10Q15642 601 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 PGS1Q32NB8 556 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 FAM102AQ5T9C2 384 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 IZUMO3Q5VZ72 239 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ALKBH2Q6NS38 261 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ALKBH5Q6P6C2 394 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 SPATA2LQ8IUW3 424 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 CENPLQ8N0S6 344 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 CAMKK1Q8N5S9 505 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 C1orf54Q8WWF1 131 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 S100A13Q99584 98 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 RBBP8Q99708 897 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ROGDIQ9GZN7 287 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 LSM7Q9UK45 103 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 SLC30A1Q9Y6M5 507 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 SPACA6W5XKT8 324 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 EHBP1L1Q8N3D4 1523 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 SMIM31A0A1B0GVY4 71 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 CFAP73A6NFT4 308 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 SAC3D1A6NKF1 404 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 PBLDP30039 288 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-210ENST00000471181 NLRP11P59045 1033 aaKnown RBP7.21□□□□□ -1.25
BRCA1-210ENST00000471181 RPS8P62241 208 aaKnown RBP7.21□□□□□ -1.25
BRCA1-210ENST00000471181 KRR1Q13601 381 aaKnown RBP7.21□□□□□ -1.25
BRCA1-210ENST00000471181 TOMM20Q15388 145 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 SGSM1Q2NKQ1 1148 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 KLHL12Q53G59 568 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 ZRANB3Q5FWF4 1079 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 PROSER1Q86XN7 944 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 PALB2Q86YC2 1186 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 PTPRN2Q92932 1015 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 NACC2Q96BF6 587 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 TSPAN17Q96FV3 270 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 RSPH9Q9H1X1 276 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-210ENST00000471181 KLC4Q9NSK0 619 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 SLC9A2Q9UBY0 812 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 AOX1Q06278 1338 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 SAMD9LQ8IVG5 1584 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 RALGAPBQ86X10 1494 aa7.21□□□□□ -1.25
BRCA1-210ENST00000471181 NCK2O43639 380 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 KRT20P35900 424 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ARL3P36405 182 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 IREB2P48200 963 aaKnown RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 IRAK1BP1Q5VVH5 260 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 PODNQ7Z5L7 613 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 GPR141Q7Z602 305 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 PCYOX1LQ8NBM8 494 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ZNF624Q9P2J8 865 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 PPP2R3BQ9Y5P8 575 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 TCP11X1B4DZS4 312 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 AREL1O15033 823 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 EIF3DO15371 548 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ERVK-10P10266 1014 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 AKAP5P24588 427 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 GNA15P30679 374 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 GUCY1A2P33402 732 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ETFBP38117 255 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 MAGEA10P43363 369 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 CCT3P49368 545 aaKnown RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 AP1S2P56377 157 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ZBED6P86452 979 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 GFPT1Q06210 699 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 STX4Q12846 297 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 FBXW10Q5XX13 1052 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 EMBQ6PCB8 327 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 MTHFD1LQ6UB35 978 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 C11orf57Q6ZUT1 292 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 IL17RAQ96F46 866 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 MOV10L1Q9BXT6 1211 aaKnown RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 UBE2OQ9C0C9 1292 aaKnown RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 STN1Q9H668 368 aaKnown RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 PCMTD2Q9NV79 361 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 LCMT1Q9UIC8 334 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 APPL1Q9UKG1 709 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 BMP3P12645 472 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 CDC25AP30304 524 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ARSEP51690 589 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 KCNQ4P56696 695 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 RHAGQ02094 409 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 SLFNL1Q499Z3 407 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 DAB2IPQ5VWQ8 1189 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 CDC73Q6P1J9 531 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ZNF790Q6PG37 636 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 TRIM65Q6PJ69 517 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 AK8Q96MA6 479 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ECSITQ9BQ95 431 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 PHACTR1Q9C0D0 580 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 VTA1Q9NP79 307 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 XPO7Q9UIA9 1087 aaKnown RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 INO80Q9ULG1 1556 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-210ENST00000471181 LMTK3Q96Q04 1460 aa7.21□□□□□ -1.26
BRCA1-210ENST00000471181 YTHDC2Q9H6S0 1430 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 HEATR9A2RTY3 570 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CENPXA8MT69 81 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PRODHO43272 600 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms