RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SYN3O14994 580 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 KIAA0391O15091 583 aaKnown RBP15.35■□□□□ 0.05
TOP3B-215ENST00000470338 IL18RAPO95256 599 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 MYL1P05976 194 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 NFICP08651 508 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 SPATA31D3P0C874 917 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 MRPL58Q14197 206 aaKnown RBP15.35■□□□□ 0.05
TOP3B-215ENST00000470338 TMEM132DQ14C87 1099 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 ATAT1Q5SQI0 421 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 ELMSAN1Q6PJG2 1045 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 TMC5Q6UXY8 1006 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 C15orf39Q6ZRI6 1047 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 SPATA31D4Q6ZUB0 917 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 ANKS3Q6ZW76 656 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 GPR149Q86SP6 731 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 GLYCTKQ8IVS8 523 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 BEST2Q8NFU1 509 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 FEZF2Q8TBJ5 459 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 KHSRPQ92945 711 aaKnown RBP eCLIP15.35■□□□□ 0.05
TOP3B-215ENST00000470338 RIPOR3Q96MK2 946 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 CBWD1Q9BRT8 395 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 FAM213AQ9BRX8 229 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 RHOBTB2Q9BYZ6 727 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 UBE4BO95155 1302 aa15.35■□□□□ 0.05
TOP3B-215ENST00000470338 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 M0QZQ0 153 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 PIRO00625 290 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 ADAM12O43184 909 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 EXTL3O43909 919 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 TBC1D4O60343 1298 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 WEE2P0C1S8 567 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 MCM4P33991 863 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 OR1D2P34982 312 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
TOP3B-215ENST00000470338 GUCY2FP51841 1108 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 RAB33AQ14088 237 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 BMT2Q1RMZ1 405 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 ARMCX5Q6P1M9 558 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 RSPO2Q6UXX9 243 aaPredicted RBP15.34■□□□□ 0.05
TOP3B-215ENST00000470338 CYP26C1Q6V0L0 522 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 NT5DC4Q86YG4 428 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 BRSK2Q8IWQ3 736 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 FSIP1Q8NA03 581 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 KREMEN2Q8NCW0 462 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 SCFD1Q8WVM8 642 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 SAAL1Q96ER3 474 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 POMKQ9H5K3 350 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 SLC39A2Q9NP94 309 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 FBXW11Q9UKB1 542 aa15.34■□□□□ 0.05
TOP3B-215ENST00000470338 CCDC195A0A1B0GUA6 201 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 TGFB1I1O43294 461 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 PAX3P23760 479 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 SNRPFP62306 86 aaKnown RBP15.33■□□□□ 0.04
TOP3B-215ENST00000470338 PSMD2Q13200 908 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 VARS2Q5ST30 1063 aaKnown RBP15.33■□□□□ 0.04
TOP3B-215ENST00000470338 C9orf57Q5W0N0 161 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 EFCAB13Q8IY85 973 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 GPD1LQ8N335 351 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 APPL2Q8NEU8 664 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 RPGRIP1Q96KN7 1286 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 PCDHB8Q9UN66 801 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 CDY1Q9Y6F8 540 aa15.33■□□□□ 0.04
TOP3B-215ENST00000470338 GOLGA8IPA6NC78 632 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 GOLGA8JA6NMD2 632 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 H7C4K7 107 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 PPEF2O14830 753 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 RFPL2O75678 378 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 ZMYND10O75800 440 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 ZNF202O95125 648 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 WNT7BP56706 349 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 LILRA4P59901 499 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 STK4Q13043 487 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 KRBA2Q6ZNG9 492 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 ZNF707Q96C28 371 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-215ENST00000470338 EPHX3Q9H6B9 360 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 AGPAT3Q9NRZ7 376 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 ZDHHC7Q9NXF8 308 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
TOP3B-215ENST00000470338 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-215ENST00000470338 TSC2P49815 1807 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 ABLIM3O94929 683 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 OAZ2O95190 189 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 RPN1P04843 607 aaKnown RBP15.31■□□□□ 0.04
TOP3B-215ENST00000470338 DPYDQ12882 1025 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 KNOP1Q1ED39 458 aaKnown RBP15.31■□□□□ 0.04
TOP3B-215ENST00000470338 UVSSAQ2YD98 709 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 RTL10Q7L3V2 364 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 NELFCDQ8IXH7 590 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 ZNF461Q8TAF7 563 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 KIAA1586Q9HCI6 787 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms