RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 FAXDC2Q96IV6 333 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 AIFM2Q9BRQ8 373 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 TLR10Q9BXR5 811 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 TLK1Q9UKI8 766 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 TRHDEQ9UKU6 1024 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHGA9Q9Y5G4 932 aaKnown RBP7.11□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHGA8Q9Y5G5 932 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHGA7Q9Y5G6 932 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHGA3Q9Y5H0 932 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 POLR2AP24928 1970 aaKnown RBP7.1□□□□□ -1.27
COL11A1-208ENST00000470170 MYADML2A6NDP7 307 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 MGST3O14880 152 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 SLC16A1P53985 500 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 SIM1P81133 766 aaPredicted RBP7.1□□□□□ -1.27
COL11A1-208ENST00000470170 MRPS21P82921 87 aaKnown RBP7.1□□□□□ -1.27
COL11A1-208ENST00000470170 IL10RAQ13651 578 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 C3orf36Q3SXR2 165 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 SYDE2Q5VT97 1194 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 COLGALT2Q8IYK4 626 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 Q8NA96 180 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 SSH3Q8TE77 659 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 HDAC10Q969S8 669 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
COL11A1-208ENST00000470170 LIMCH1Q9UPQ0 1083 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 IPPQ9Y573 584 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
COL11A1-208ENST00000470170 HTRA2O43464 458 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 AGFG2O95081 481 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 CDKN1CP49918 316 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 ZNF280AP59817 542 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 MRPS35P82673 323 aaKnown RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 MTMR1Q13613 665 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 ZNF362Q5T0B9 420 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 BOLLQ8N9W6 283 aaKnown RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 FAM98AQ8NCA5 519 aaKnown RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 CAGE1Q8TC20 777 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 MED15Q96RN5 788 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 KIAA1586Q9HCI6 787 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 KCTD5Q9NXV2 234 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 VSX1Q9NZR4 365 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-208ENST00000470170 LRIT1Q9P2V4 623 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 CDYLQ9Y232 598 aa7.09□□□□□ -1.27
COL11A1-208ENST00000470170 TRGV11A0A075B6L2 103 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 KLHL33A6NCF5 533 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 IGSF3O75054 1194 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 EDNRBP24530 442 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 GUCY2FP51841 1108 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 ITKQ08881 620 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 PABPC1LQ4VXU2 614 aaKnown RBP7.08□□□□□ -1.28
COL11A1-208ENST00000470170 UTP14CQ5TAP6 766 aaKnown RBP7.08□□□□□ -1.28
COL11A1-208ENST00000470170 SYCE2Q6PIF2 218 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 LNX2Q8N448 690 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 ACTRT2Q8TDY3 377 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 MTMR8Q96EF0 704 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 DUSP26Q9BV47 211 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 FOXJ2Q9P0K8 574 aa7.08□□□□□ -1.28
COL11A1-208ENST00000470170 CCDC154A6NI56 674 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 FZD9O00144 591 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 KATNA1O75449 491 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 CD1AP06126 327 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 CDK11BP21127 795 aaKnown RBP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 IL12RB1P42701 662 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 C21orf58P58505 322 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 KIF23Q02241 960 aaPredicted RBP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 FAM50AQ14320 339 aaKnown RBP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 PCBP2Q15366 365 aaKnown RBP eCLIP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 FLYWCH1Q4VC44 716 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 RNF187Q5TA31 235 aaPredicted RBP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 KAT5Q92993 513 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 TMEM125Q96AQ2 219 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 TEKT5Q96M29 485 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 DMTF1Q9Y222 760 aa7.07□□□□□ -1.28
COL11A1-208ENST00000470170 COL11A2P13942 1736 aaPredicted RBP7.07□□□□□ -1.28
COL11A1-208ENST00000470170 SGTAO43765 313 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 ZNF37AP17032 561 aaPredicted RBP7.06□□□□□ -1.28
COL11A1-208ENST00000470170 RARRES1P49788 294 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 SF3B3Q15393 1217 aaKnown RBP7.06□□□□□ -1.28
COL11A1-208ENST00000470170 CLPTM1LQ96KA5 538 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 MRGPRX4Q96LA9 322 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 KLHL32Q96NJ5 620 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 LRFN3Q9BTN0 628 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 PACSIN1Q9BY11 444 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 SLC45A2Q9UMX9 530 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 PCDHB1Q9Y5F3 818 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 SBNO2Q9Y2G9 1366 aa7.06□□□□□ -1.28
COL11A1-208ENST00000470170 GABRDO14764 452 aa7.05□□□□□ -1.28
COL11A1-208ENST00000470170 CD38P28907 300 aa7.05□□□□□ -1.28
COL11A1-208ENST00000470170 SP5Q6BEB4 398 aaPredicted RBP7.05□□□□□ -1.28
COL11A1-208ENST00000470170 IL17RDQ8NFM7 739 aa7.05□□□□□ -1.28
COL11A1-208ENST00000470170 COA7Q96BR5 231 aa7.05□□□□□ -1.28
COL11A1-208ENST00000470170 PDLIM2Q96JY6 352 aa7.05□□□□□ -1.28
COL11A1-208ENST00000470170 JKAMPQ9P055 326 aa7.05□□□□□ -1.28
COL11A1-208ENST00000470170 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.05□□□□□ -1.28
COL11A1-208ENST00000470170 A0A1W2PS29 197 aa7.04□□□□□ -1.28
COL11A1-208ENST00000470170 SHTN1A0MZ66 631 aa7.04□□□□□ -1.28
COL11A1-208ENST00000470170 PEX1O43933 1283 aa7.04□□□□□ -1.28
COL11A1-208ENST00000470170 KCNA2P16389 499 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms