RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 LLGL2Q6P1M3 1020 aa27.48■■□□□ 1.99
KPNA4-202ENST00000469804 C1orf127Q8N9H9 656 aa27.48■■□□□ 1.99
KPNA4-202ENST00000469804 MFSD14AQ96MC6 490 aa27.48■■□□□ 1.99
KPNA4-202ENST00000469804 POP1Q99575 1024 aaKnown RBP27.48■■□□□ 1.99
KPNA4-202ENST00000469804 TTPALQ9BTX7 342 aa27.48■■□□□ 1.99
KPNA4-202ENST00000469804 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.48■■□□□ 1.99
KPNA4-202ENST00000469804 PIRO00625 290 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 GLP2RO95838 553 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 ITGB3P05106 788 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 CNPP09543 421 aaKnown RBP27.47■■□□□ 1.99
KPNA4-202ENST00000469804 RPL17P18621 184 aaKnown RBP27.47■■□□□ 1.99
KPNA4-202ENST00000469804 FGFR3P22607 806 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 COL19A1Q14993 1142 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 SURF1Q15526 300 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 NFIL3Q16649 462 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 KLHL10Q6JEL2 608 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.47■■□□□ 1.99
KPNA4-202ENST00000469804 GLYCTKQ8IVS8 523 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 EFHBQ8N7U6 833 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 TMEM174Q8WUU8 243 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 PABPC5Q96DU9 382 aaKnown RBP27.47■■□□□ 1.99
KPNA4-202ENST00000469804 EEF2KMTQ96G04 330 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 KLHL5Q96PQ7 755 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 CGRRF1Q99675 332 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 UBE2ZQ9H832 354 aaPredicted RBP27.47■■□□□ 1.99
KPNA4-202ENST00000469804 INTS13Q9NVM9 706 aa27.47■■□□□ 1.99
KPNA4-202ENST00000469804 PPP1R3GB7ZBB8 358 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 SPTLC1O15269 473 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 TBX10O75333 385 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 POLR2BP30876 1174 aaKnown RBP27.46■■□□□ 1.99
KPNA4-202ENST00000469804 TFF2Q03403 129 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 DLX2Q07687 328 aaPredicted RBP27.46■■□□□ 1.99
KPNA4-202ENST00000469804 MYBPC2Q14324 1141 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 CENPPQ6IPU0 288 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 WDR49Q8IV35 697 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 SUSD3Q96L08 255 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 FNBP1Q96RU3 617 aa27.46■■□□□ 1.99
KPNA4-202ENST00000469804 GTPBP4Q9BZE4 634 aaKnown RBP27.46■■□□□ 1.99
KPNA4-202ENST00000469804 TEX28O15482 410 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 TRAPPC3O43617 180 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 AKAP3O75969 853 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 TNNI1P19237 187 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 LTBRP36941 435 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 ADAM15Q13444 863 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 STIM1Q13586 685 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 PSMD5Q16401 504 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 CTC1Q2NKJ3 1217 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 EDRF1Q3B7T1 1238 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 ANKRD40Q6AI12 368 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 LNX1Q8TBB1 728 aaPredicted RBP27.45■■□□□ 1.98
KPNA4-202ENST00000469804 CACTINQ8WUQ7 758 aaKnown RBP27.45■■□□□ 1.98
KPNA4-202ENST00000469804 PIK3R5Q8WYR1 880 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 HLA-CQ95604 372 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 ANKRD36BP1Q96IX9 119 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 THEGQ9P2T0 379 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 BARX2Q9UMQ3 279 aaPredicted RBP27.45■■□□□ 1.98
KPNA4-202ENST00000469804 CTNND2Q9UQB3 1225 aa27.45■■□□□ 1.98
KPNA4-202ENST00000469804 MTCL1Q9Y4B5 1905 aaKnown RBP27.44■■□□□ 1.98
KPNA4-202ENST00000469804 PSMA7O14818 248 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 LILRA4P59901 499 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 ADAM9Q13443 819 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 TRIML1Q8N9V2 468 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 CXorf38Q8TB03 319 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 ZNF516Q92618 1163 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 CDCA3Q99618 268 aaPredicted RBP27.44■■□□□ 1.98
KPNA4-202ENST00000469804 TSG101Q99816 390 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 EMILIN2Q9BXX0 1053 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 RXFP1Q9HBX9 757 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 SIX4Q9UIU6 781 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 AGAP1Q9UPQ3 857 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 SSX2IPQ9Y2D8 614 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 FRMD4BQ9Y2L6 1034 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 HCFC2Q9Y5Z7 792 aa27.44■■□□□ 1.98
KPNA4-202ENST00000469804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 LRRIQ3A6PVS8 624 aaPredicted RBP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 H3BQ06 376 aaPredicted RBP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 TNNC2P02585 160 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 KRT19P08727 400 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 EPCAMP16422 314 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 KCNA5P22460 613 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 CCNE1P24864 410 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 RPL13P26373 211 aaKnown RBP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 KLRC2P26717 231 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 AARSP49588 968 aaKnown RBP eCLIP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 NDUFV1P49821 464 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 DLG4P78352 724 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 KCNC3Q14003 757 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 DSTYKQ6XUX3 929 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 CSGALNACT2Q8N6G5 542 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 NELFBQ8WX92 580 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 DHTKD1Q96HY7 919 aaPredicted RBP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 ITGA11Q9UKX5 1188 aa27.43■■□□□ 1.98
KPNA4-202ENST00000469804 TIMM13Q9Y5L4 95 aaPredicted RBP27.43■■□□□ 1.98
KPNA4-202ENST00000469804 TAF6P49848 677 aa27.42■■□□□ 1.98
KPNA4-202ENST00000469804 DUOXA2Q1HG44 320 aa27.42■■□□□ 1.98
KPNA4-202ENST00000469804 VARS2Q5ST30 1063 aaKnown RBP27.42■■□□□ 1.98
KPNA4-202ENST00000469804 FAM186BQ8IYM0 893 aa27.42■■□□□ 1.98
KPNA4-202ENST00000469804 PARD3BQ8TEW8 1205 aa27.42■■□□□ 1.98
KPNA4-202ENST00000469804 PCDHB8Q9UN66 801 aa27.42■■□□□ 1.98
KPNA4-202ENST00000469804 COG5Q9UP83 839 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms