RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 RXFP1Q9HBX9 757 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 ALG13Q9NP73 1137 aaKnown RBP12.84□□□□□ -0.35
VARS2-205ENST00000469358 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 KLHL14Q9P2G3 628 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
VARS2-205ENST00000469358 LY75O60449 1722 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 QSER1Q2KHR3 1735 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 CBX6O95503 412 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 MAGEA4P43358 317 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 GPC3P51654 580 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 CYP24A1Q07973 514 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 MYBPC2Q14324 1141 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 EFTUD2Q15029 972 aaKnown RBP eCLIP12.83□□□□□ -0.364e-9■■■■■ 39.6
VARS2-205ENST00000469358 PCNX4Q63HM2 1172 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 KLF6Q99612 283 aaPredicted RBP12.83□□□□□ -0.36
VARS2-205ENST00000469358 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 NEU2Q9Y3R4 380 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 EXOC1LA0A1B0GW35 172 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 H0Y3Z8 333 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 RPA3P35244 121 aaPredicted RBP12.83□□□□□ -0.36
VARS2-205ENST00000469358 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
VARS2-205ENST00000469358 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 ASRGL1Q7L266 308 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 CROCCP2Q86T23 111 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 MORC4Q8TE76 937 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 NUMBLQ9Y6R0 609 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 LRRC37AA6NMS7 1700 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 ANKRD31Q8N7Z5 1873 aa12.83□□□□□ -0.36
VARS2-205ENST00000469358 GOLGA8RI6L899 631 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 IFNB1P01574 187 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 KRT15P19012 456 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 TNNI1P19237 187 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 NCKAP1LP55160 1127 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 KLF1Q13351 362 aaPredicted RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 TRIM68Q6AZZ1 485 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 TMEM270Q6UE05 265 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 VSIG1Q86XK7 387 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 C12orf56Q8IXR9 622 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 RSRC1Q96IZ7 334 aaKnown RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 ZBTB45Q96K62 511 aaPredicted RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 VPS37BQ9H9H4 285 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 CHKBQ9Y259 395 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 CDH16O75309 829 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 ENTPD3O75355 529 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 HARSP12081 509 aaKnown RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 GM2AP17900 193 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 CAP2P40123 477 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 RIPK1Q13546 671 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 MTFR1Q15390 333 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 MEX3CQ5U5Q3 659 aaKnown RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 KCTD17Q8N5Z5 321 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 SLCO2A1Q92959 643 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 MAGEB18Q96M61 343 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 ZNF862O60290 1169 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 MYBL1P10243 752 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 PECAM1P16284 738 aaPredicted RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 RPS6P62753 249 aaKnown RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 OVGP1Q12889 678 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 MAML1Q92585 1016 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 WNK4Q96J92 1243 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 CEP170P1Q96L14 293 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 NOP53Q9NZM5 478 aaKnown RBP12.82□□□□□ -0.36
VARS2-205ENST00000469358 PHTF1Q9UMS5 762 aa12.82□□□□□ -0.36
VARS2-205ENST00000469358 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.82□□□□□ -0.36
VARS2-205ENST00000469358 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 HSD17B4P51659 736 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 NRLP54845 237 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 DYNLT1P63172 113 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ARHGEF18Q6ZSZ5 1173 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 KIAA1683Q9H0B3 1180 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 APOBEC3GQ9HC16 384 aaKnown RBP12.81□□□□□ -0.36
VARS2-205ENST00000469358 C1orf112Q9NSG2 853 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 COQ4Q9Y3A0 265 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 FAM47DPA6NHR8 397 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
VARS2-205ENST00000469358 PROSCO94903 275 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ALADP13716 330 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 NLRP11P59045 1033 aaKnown RBP12.81□□□□□ -0.36
VARS2-205ENST00000469358 GPS1Q13098 491 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 MAMLD1Q13495 774 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 MFSD7Q6UXD7 560 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 CRELD2Q6UXH1 353 aaPredicted RBP12.81□□□□□ -0.36
VARS2-205ENST00000469358 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 FAXDC2Q96IV6 333 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
VARS2-205ENST00000469358 ZNF70Q9UC06 446 aaPredicted RBP12.81□□□□□ -0.36
VARS2-205ENST00000469358 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms