RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PID1Q7Z2X4 250 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 SEPT8Q92599 483 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 TMEM169Q96HH4 297 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 P2RX7Q99572 595 aaKnown RBP15.88■□□□□ 0.13
LIMS2-213ENST00000469300 WDR18Q9BV38 432 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 PDGFRBP09619 1106 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 FAM200BP0CF97 657 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 MTF1Q14872 753 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 FOXP3Q9BZS1 431 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 DDX47Q9H0S4 455 aaKnown RBP15.88■□□□□ 0.13
LIMS2-213ENST00000469300 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.88■□□□□ 0.13
LIMS2-213ENST00000469300 SRGAP2O75044 1071 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 AKR1A1P14550 325 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 FXR1P51114 621 aaKnown RBP eCLIP15.88■□□□□ 0.13
LIMS2-213ENST00000469300 KSR1Q8IVT5 923 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 SLC35G2Q8TBE7 412 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 PDCD6IPQ8WUM4 868 aaKnown RBP15.88■□□□□ 0.13
LIMS2-213ENST00000469300 ZNF512Q96ME7 567 aaPredicted RBP15.88■□□□□ 0.13
LIMS2-213ENST00000469300 DPP3Q9NY33 737 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 FAM198AQ9UFP1 575 aa15.88■□□□□ 0.13
LIMS2-213ENST00000469300 MED1Q15648 1581 aaPredicted RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 SLIT3O75094 1523 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 H7C4K7 107 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 ALDH7A1P49419 539 aaKnown RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 CLCN3P51790 818 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 EIF3EP60228 445 aaKnown RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 PRAMEP78395 509 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 KRT33BQ14525 404 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 TTC23LQ6PF05 361 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 KRT35Q92764 455 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 CHP1Q99653 195 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 MTG1Q9BT17 334 aaPredicted RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 FAN1Q9Y2M0 1017 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 MTSS1O43312 755 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 UPP2O95045 317 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 CYP3A4P08684 503 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 CUL2Q13617 745 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 ZNF720Q7Z2F6 126 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 AGPAT5Q9NUQ2 364 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 ADM5C9JUS6 153 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 ALDH5A1P51649 535 aaPredicted RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 P3H1Q32P28 736 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 TTC8Q8TAM2 541 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 SPIRE2Q8WWL2 714 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 HAUS8Q9BT25 410 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 RANBP17Q9H2T7 1088 aaKnown RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 DYRK4Q9NR20 520 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 TARSL2A2RTX5 802 aaKnown RBP15.87■□□□□ 0.13
LIMS2-213ENST00000469300 ZWINTO95229 277 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 TTC4O95801 387 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 DEUP1Q05D60 604 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 IFT88Q13099 833 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 IQSEC1Q6DN90 963 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 CENPPQ6IPU0 288 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 GTF3C4Q9UKN8 822 aa15.87■□□□□ 0.13
LIMS2-213ENST00000469300 RGS7P49802 495 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 ELAVL2Q12926 359 aaKnown RBP15.86■□□□□ 0.13
LIMS2-213ENST00000469300 GPAT2Q6NUI2 795 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 C4orf22Q6V702 233 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 CGRRF1Q99675 332 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 RSAD1Q9HA92 442 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 DSEQ9UL01 958 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 SLC2A3P11169 496 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 ALDH1A3P47895 512 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 WDR75Q8IWA0 830 aaKnown RBP15.86■□□□□ 0.13
LIMS2-213ENST00000469300 SPATA4Q8NEY3 305 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
LIMS2-213ENST00000469300 CFAP61Q8NHU2 1237 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 CPA5Q8WXQ8 436 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 SLC5A5Q92911 643 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 ACTR5Q9H9F9 607 aaPredicted RBP15.86■□□□□ 0.13
LIMS2-213ENST00000469300 CYP3A43Q9HB55 503 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 PLAAQ9Y263 795 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 ITGB3P05106 788 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 PNMA6AP0CW24 399 aaPredicted RBP15.86■□□□□ 0.13
LIMS2-213ENST00000469300 ATICP31939 592 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 RAB27AP51159 221 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 PMS2P54278 862 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 BOLA3Q53S33 107 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 RIOX2Q8IUF8 465 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 STARD7Q9NQZ5 370 aa15.86■□□□□ 0.13
LIMS2-213ENST00000469300 NCK2O43639 380 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 OPHN1O60890 802 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 ERVK-24P63145 666 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 DCLK2Q8N568 766 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 SDCCAG3Q96C92 435 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
LIMS2-213ENST00000469300 PLAGL2Q9UPG8 496 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 ZC3H4Q9UPT8 1303 aaKnown RBP15.85■□□□□ 0.13
LIMS2-213ENST00000469300 ACCSLQ4AC99 568 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 IZUMO3Q5VZ72 239 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 SLC30A5Q8TAD4 765 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 ZNF518BQ9C0D4 1074 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 CATSPERBQ9H7T0 1116 aa15.85■□□□□ 0.13
LIMS2-213ENST00000469300 DNAJC17Q9NVM6 304 aaKnown RBP15.85■□□□□ 0.13
LIMS2-213ENST00000469300 TTC7AQ9ULT0 858 aaPredicted RBP15.85■□□□□ 0.13
LIMS2-213ENST00000469300 C3orf70A6NLC5 250 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms