RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 STARD6P59095 220 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 SNW1Q13573 536 aaKnown RBP20.88■□□□□ 0.93
COL9A3-206ENST00000466532 TPGS2Q68CL5 300 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 TCEAL8Q8IYN2 117 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 APPL2Q8NEU8 664 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 PJA1Q8NG27 643 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 CORO1BQ9BR76 489 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 PLEKHA5Q9HAU0 1116 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 AVENQ9NQS1 362 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-206ENST00000466532 PCDHB8Q9UN66 801 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 INSL5Q9Y5Q6 135 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 FAM186AA6NE01 2351 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 TICRRQ7Z2Z1 1910 aa20.88■□□□□ 0.93
COL9A3-206ENST00000466532 K7ENM7 598 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 FAM13AO94988 1023 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 CEBPBP17676 345 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 TNFSF9P41273 254 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 PPP2R3AQ06190 1150 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 MLF2Q15773 248 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-206ENST00000466532 TMEM130Q8N3G9 435 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 MYCT1Q8N699 235 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 RASSF8Q8NHQ8 419 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 LRRC15Q8TF66 581 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 KIF12Q96FN5 646 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 GDE1Q9NZC3 331 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 DLGAP2Q9P1A6 1054 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 TBX20Q9UMR3 447 aa20.87■□□□□ 0.93
COL9A3-206ENST00000466532 TTC26A0AVF1 554 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 HNRNPDLO14979 420 aaKnown RBP20.86■□□□□ 0.93
COL9A3-206ENST00000466532 BMP15O95972 392 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 KRT18P05783 430 aaKnown RBP20.86■□□□□ 0.93
COL9A3-206ENST00000466532 PLCG1P19174 1290 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 MARCKSP29966 332 aaPredicted RBP20.86■□□□□ 0.93
COL9A3-206ENST00000466532 PFKPQ01813 784 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 PRKCQQ04759 706 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 GRIN1Q05586 938 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 ADCY1Q08828 1119 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 KYAT1Q16773 422 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 SLC44A4Q53GD3 710 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 KCNN1Q92952 543 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 BLOC1S4Q9NUP1 217 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 UBQLN1Q9UMX0 589 aaKnown RBP20.86■□□□□ 0.93
COL9A3-206ENST00000466532 SCN1AP35498 2009 aa20.86■□□□□ 0.93
COL9A3-206ENST00000466532 RIF1Q5UIP0 2472 aaKnown RBP20.86■□□□□ 0.93
COL9A3-206ENST00000466532 KANSL1LA0AUZ9 987 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 LRRN2O75325 713 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 ECI2O75521 394 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 CPB1P15086 417 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 LRPAP1P30533 357 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 LONP1P36776 959 aaKnown RBP20.85■□□□□ 0.93
COL9A3-206ENST00000466532 MCM6Q14566 821 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 KARSQ15046 597 aaKnown RBP20.85■□□□□ 0.93
COL9A3-206ENST00000466532 PRSS36Q5K4E3 855 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 POTEHQ6S545 545 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 BRAPQ7Z569 592 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 RAD54LQ92698 747 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 ZHX3Q9H4I2 956 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 PARVGQ9HBI0 331 aa20.85■□□□□ 0.93
COL9A3-206ENST00000466532 AFF4Q9UHB7 1163 aaKnown RBP20.85■□□□□ 0.93
COL9A3-206ENST00000466532 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.85■□□□□ 0.93
COL9A3-206ENST00000466532 PTPRZ1P23471 2315 aaPredicted RBP20.85■□□□□ 0.93
COL9A3-206ENST00000466532 COL4A2P08572 1712 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 LACTBL1A8MY62 500 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 M0QZQ0 153 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 ZNF197O14709 1029 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 OGTO15294 1046 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 XPOTO43592 962 aaKnown RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 TRAK2O60296 914 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 PIGRP01833 764 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 GLULP15104 373 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 CYP3A5P20815 502 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 SCP2P22307 547 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 ZNF131P52739 623 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 YWHAHQ04917 246 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 SF3A1Q15459 793 aaKnown RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 ZBTB6Q15916 424 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 ZBTB41Q5SVQ8 909 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 RNF19BQ6ZMZ0 732 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 PDZD4Q76G19 769 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 ELMOD1Q8N336 334 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 TCEAL4Q96EI5 215 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 DDX23Q9BUQ8 820 aaKnown RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 PLA2G2FQ9BZM2 168 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 RPF1Q9H9Y2 349 aaKnown RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 MAFFQ9ULX9 164 aa20.84■□□□□ 0.93
COL9A3-206ENST00000466532 TIMM13Q9Y5L4 95 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-206ENST00000466532 FAM189A1O60320 539 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 TBCAO75347 108 aaKnown RBP20.83■□□□□ 0.93
COL9A3-206ENST00000466532 GUCY2FP51841 1108 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 TWF1Q12792 350 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 UBXN2BQ14CS0 331 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 ENOX2Q16206 610 aaKnown RBP20.83■□□□□ 0.93
COL9A3-206ENST00000466532 CYP4A22Q5TCH4 519 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 TANGO2Q6ICL3 276 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 IQCEQ6IPM2 695 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 C1orf210Q8IVY1 113 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 ADSSL1Q8N142 457 aa20.83■□□□□ 0.93
COL9A3-206ENST00000466532 LARP4BQ92615 738 aaKnown RBP20.83■□□□□ 0.93
COL9A3-206ENST00000466532 ZNF512Q96ME7 567 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-206ENST00000466532 MSTO1Q9BUK6 570 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms