RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 FAM78AQ5JUQ0 283 aa10.49□□□□□ -0.73
APP-213ENST00000464867 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
APP-213ENST00000464867 RALYLQ86SE5 291 aaKnown RBP10.49□□□□□ -0.73
APP-213ENST00000464867 HACE1Q8IYU2 909 aa10.49□□□□□ -0.73
APP-213ENST00000464867 RNF217Q8TC41 542 aa10.49□□□□□ -0.73
APP-213ENST00000464867 GAD1Q99259 594 aa10.49□□□□□ -0.73
APP-213ENST00000464867 CLSTN3Q9BQT9 956 aa10.49□□□□□ -0.73
APP-213ENST00000464867 CCDC86Q9H6F5 360 aaKnown RBP10.49□□□□□ -0.73
APP-213ENST00000464867 POLMQ9NP87 494 aaPredicted RBP10.49□□□□□ -0.73
APP-213ENST00000464867 AVENQ9NQS1 362 aaPredicted RBP10.49□□□□□ -0.73
APP-213ENST00000464867 NUP205Q92621 2012 aa10.49□□□□□ -0.73
APP-213ENST00000464867 TENM4Q6N022 2769 aa10.48□□□□□ -0.73
APP-213ENST00000464867 BCLAF3A2AJT9 711 aaKnown RBP10.48□□□□□ -0.73
APP-213ENST00000464867 FAM221BA6H8Z2 402 aa10.48□□□□□ -0.73
APP-213ENST00000464867 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
APP-213ENST00000464867 LRG1P02750 347 aa10.48□□□□□ -0.73
APP-213ENST00000464867 CEBPBP17676 345 aa10.48□□□□□ -0.73
APP-213ENST00000464867 SDSP20132 328 aa10.48□□□□□ -0.73
APP-213ENST00000464867 FCARP24071 287 aa10.48□□□□□ -0.73
APP-213ENST00000464867 SCNN1GP51170 649 aa10.48□□□□□ -0.73
APP-213ENST00000464867 SIM1P81133 766 aaPredicted RBP10.48□□□□□ -0.73
APP-213ENST00000464867 SCAPQ12770 1279 aa10.48□□□□□ -0.73
APP-213ENST00000464867 DRP2Q13474 957 aa10.48□□□□□ -0.73
APP-213ENST00000464867 KARSQ15046 597 aaKnown RBP10.48□□□□□ -0.73
APP-213ENST00000464867 SLC5A9Q2M3M2 681 aa10.48□□□□□ -0.73
APP-213ENST00000464867 PLK5Q496M5 336 aa10.48□□□□□ -0.73
APP-213ENST00000464867 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
APP-213ENST00000464867 FAM171A1Q5VUB5 890 aa10.48□□□□□ -0.73
APP-213ENST00000464867 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
APP-213ENST00000464867 VITQ6UXI7 678 aa10.48□□□□□ -0.73
APP-213ENST00000464867 ZNF605Q86T29 641 aa10.48□□□□□ -0.73
APP-213ENST00000464867 PIK3R5Q8WYR1 880 aa10.48□□□□□ -0.73
APP-213ENST00000464867 SMARCD2Q92925 531 aa10.48□□□□□ -0.73
APP-213ENST00000464867 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
APP-213ENST00000464867 PGBD1Q96JS3 809 aa10.48□□□□□ -0.73
APP-213ENST00000464867 JPH2Q9BR39 696 aaPredicted RBP10.48□□□□□ -0.73
APP-213ENST00000464867 ANO3Q9BYT9 981 aa10.48□□□□□ -0.73
APP-213ENST00000464867 DIAPH3Q9NSV4 1193 aa10.48□□□□□ -0.73
APP-213ENST00000464867 SLC35F4A4IF30 521 aa10.47□□□□□ -0.73
APP-213ENST00000464867 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
APP-213ENST00000464867 ZNF862O60290 1169 aa10.47□□□□□ -0.73
APP-213ENST00000464867 DDAH1O94760 285 aa10.47□□□□□ -0.73
APP-213ENST00000464867 MICAL2O94851 1124 aa10.47□□□□□ -0.73
APP-213ENST00000464867 SREBF1P36956 1147 aa10.47□□□□□ -0.73
APP-213ENST00000464867 PTGIRP43119 386 aa10.47□□□□□ -0.73
APP-213ENST00000464867 PDE1AP54750 535 aa10.47□□□□□ -0.73
APP-213ENST00000464867 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 LMAN2Q12907 356 aa10.47□□□□□ -0.73
APP-213ENST00000464867 ELAVL2Q12926 359 aaKnown RBP10.47□□□□□ -0.73
APP-213ENST00000464867 RAB33AQ14088 237 aa10.47□□□□□ -0.73
APP-213ENST00000464867 MTERF2Q49AM1 385 aa10.47□□□□□ -0.73
APP-213ENST00000464867 CYP4A22Q5TCH4 519 aa10.47□□□□□ -0.73
APP-213ENST00000464867 FOXD4L5Q5VV16 416 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 PDZD4Q76G19 769 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 RALGPS2Q86X27 583 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 MFSD6LQ8IWD5 586 aa10.47□□□□□ -0.73
APP-213ENST00000464867 CAMKK1Q8N5S9 505 aa10.47□□□□□ -0.73
APP-213ENST00000464867 LNX1Q8TBB1 728 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 ASB16Q96NS5 453 aa10.47□□□□□ -0.73
APP-213ENST00000464867 TRIM6Q9C030 488 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 GLT8D2Q9H1C3 349 aa10.47□□□□□ -0.73
APP-213ENST00000464867 DUSP15Q9H1R2 295 aaPredicted RBP10.47□□□□□ -0.73
APP-213ENST00000464867 COL4A2P08572 1712 aa10.47□□□□□ -0.73
APP-213ENST00000464867 EML5Q05BV3 1969 aa10.46□□□□□ -0.73
APP-213ENST00000464867 CACNA1EQ15878 2313 aa10.46□□□□□ -0.73
APP-213ENST00000464867 SPAARA0A1B0GVQ0 90 aa10.46□□□□□ -0.73
APP-213ENST00000464867 FAM86B1E9PN63 330 aa10.46□□□□□ -0.73
APP-213ENST00000464867 SPECC1L-ADORA2AF8WAN1 911 aa10.46□□□□□ -0.73
APP-213ENST00000464867 HIP1O00291 1037 aa10.46□□□□□ -0.73
APP-213ENST00000464867 EXTL3O43909 919 aa10.46□□□□□ -0.73
APP-213ENST00000464867 ERLIN2O94905 339 aa10.46□□□□□ -0.73
APP-213ENST00000464867 FAM86B2P0C5J1 330 aa10.46□□□□□ -0.73
APP-213ENST00000464867 GBP1P32455 592 aa10.46□□□□□ -0.73
APP-213ENST00000464867 ELF1P32519 619 aa10.46□□□□□ -0.73
APP-213ENST00000464867 OR1D2P34982 312 aa10.46□□□□□ -0.73
APP-213ENST00000464867 ADCY7P51828 1080 aa10.46□□□□□ -0.73
APP-213ENST00000464867 NAPAP54920 295 aa10.46□□□□□ -0.73
APP-213ENST00000464867 SPIRE1Q08AE8 756 aa10.46□□□□□ -0.73
APP-213ENST00000464867 AP3B2Q13367 1082 aa10.46□□□□□ -0.73
APP-213ENST00000464867 HSP90AA2PQ14568 343 aaPredicted RBP10.46□□□□□ -0.73
APP-213ENST00000464867 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.73
APP-213ENST00000464867 HAUS6Q7Z4H7 955 aa10.46□□□□□ -0.73
APP-213ENST00000464867 SRGAP1Q7Z6B7 1085 aa10.46□□□□□ -0.73
APP-213ENST00000464867 C11orf74Q86VG3 221 aa10.46□□□□□ -0.73
APP-213ENST00000464867 LURAP1LQ8IV03 231 aa10.46□□□□□ -0.73
APP-213ENST00000464867 KSR1Q8IVT5 923 aa10.46□□□□□ -0.73
APP-213ENST00000464867 ZNF654Q8IZM8 581 aa10.46□□□□□ -0.73
APP-213ENST00000464867 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
APP-213ENST00000464867 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.73
APP-213ENST00000464867 UBL7Q96S82 380 aaPredicted RBP10.46□□□□□ -0.73
APP-213ENST00000464867 CORO1BQ9BR76 489 aa10.46□□□□□ -0.73
APP-213ENST00000464867 RIC8AQ9NPQ8 531 aa10.46□□□□□ -0.73
APP-213ENST00000464867 DISC1Q9NRI5 854 aa10.46□□□□□ -0.73
APP-213ENST00000464867 C2orf42Q9NWW7 574 aa10.46□□□□□ -0.73
APP-213ENST00000464867 GIT1Q9Y2X7 761 aa10.46□□□□□ -0.73
APP-213ENST00000464867 IPPQ9Y573 584 aa10.46□□□□□ -0.73
APP-213ENST00000464867 HECTD1Q9ULT8 2610 aa10.46□□□□□ -0.74
APP-213ENST00000464867 KALRNO60229 2985 aa10.46□□□□□ -0.74
APP-213ENST00000464867 URB1O60287 2271 aaKnown RBP10.45□□□□□ -0.74
APP-213ENST00000464867 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms