RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 MTERF2Q49AM1 385 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 DDX23Q9BUQ8 820 aaKnown RBP11.69□□□□□ -0.54
PITRM1-209ENST00000464395 AZI2Q9H6S1 392 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 PPANQ9NQ55 473 aaKnown RBP11.69□□□□□ -0.54
PITRM1-209ENST00000464395 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 MSCO60682 206 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 TCEA3O75764 348 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 MAPK4P31152 587 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 MAN1A1P33908 653 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 CDCA2Q69YH5 1023 aaPredicted RBP11.69□□□□□ -0.54
PITRM1-209ENST00000464395 KATNAL2Q8IYT4 538 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 ATG4AQ8WYN0 398 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 CDC42EP4Q9H3Q1 356 aaKnown RBP11.69□□□□□ -0.54
PITRM1-209ENST00000464395 ZNF302Q9NR11 478 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 BTBD7Q9P203 1132 aa11.69□□□□□ -0.54
PITRM1-209ENST00000464395 MCM3APO60318 1980 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 SORBS3O60504 671 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 AGTP01019 485 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 UBA1P22314 1058 aaKnown RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 KRT17Q04695 432 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 GRM1Q13255 1194 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 SLMAPQ14BN4 828 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 WDTC1Q8N5D0 677 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 SEC16BQ96JE7 1060 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 PASKQ96RG2 1323 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 PSTPIP1O43586 416 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 USP2O75604 605 aaPredicted RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 ECEL1O95672 775 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 OAS1P00973 400 aaKnown RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 CST3P01034 146 aaPredicted RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 KRT5P13647 590 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 CHN1P15882 459 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 TCF4P15884 667 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 PROZP22891 400 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 LIG3P49916 1009 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 ALDH5A1P51649 535 aaPredicted RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 LACTB2Q53H82 288 aaPredicted RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 DENND2CQ68D51 928 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 LBX2Q6XYB7 198 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 SYDE1Q6ZW31 735 aaPredicted RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 TRMT10CQ7L0Y3 403 aaKnown RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 USP37Q86T82 979 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 EXOC3L1Q86VI1 746 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 TARS2Q9BW92 718 aaKnown RBP11.68□□□□□ -0.54
PITRM1-209ENST00000464395 FBXO40Q9UH90 709 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 PTPN22Q9Y2R2 807 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 SNCAIPQ9Y6H5 919 aa11.68□□□□□ -0.54
PITRM1-209ENST00000464395 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 DNM1LO00429 736 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CNMDO75829 334 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 ITIH2P19823 946 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 LIG4P49917 911 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 ACTN3Q08043 901 aaPredicted RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 TREML2Q5T2D2 321 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CCDC105Q8IYK2 499 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CENPHQ9H3R5 247 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 MTUS1Q9ULD2 1270 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 ADCY3O60266 1144 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CETPP11597 493 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 MMP8P22894 467 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 TNFSF9P41273 254 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 OGDHQ02218 1023 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 C1QBPQ07021 282 aaKnown RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 TMEM63BQ5T3F8 832 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 C6orf118Q5T5N4 469 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 PHLDB2Q86SQ0 1253 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CHST13Q8NET6 341 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CCT6BQ92526 530 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 TRIM11Q96F44 468 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 ROPN1BQ9BZX4 212 aaPredicted RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 ROPN1Q9HAT0 212 aaPredicted RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 PTPRHQ9HD43 1115 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 BCCIPQ9P287 314 aaKnown RBP eCLIP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 GJB6O95452 261 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 ASS1P00966 412 aaKnown RBP11.67□□□□□ -0.54
PITRM1-209ENST00000464395 BPIFB4P59827 614 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 PPARDQ03181 441 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 CNGA2Q16280 664 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 TRIM72Q6ZMU5 477 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 HOXC10Q9NYD6 342 aa11.67□□□□□ -0.54
PITRM1-209ENST00000464395 TMEM191CA6NGB0 347 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 TMEM191BP0C7N4 346 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 RALAP11233 206 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 GCAP28676 217 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 STXBP2Q15833 593 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 CCNG2Q16589 344 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 SGO2Q562F6 1265 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 SLFN12LQ6IEE8 588 aa11.66□□□□□ -0.54
PITRM1-209ENST00000464395 APOBEC3FQ8IUX4 373 aaKnown RBP11.66□□□□□ -0.54
PITRM1-209ENST00000464395 BRSK2Q8IWQ3 736 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms