RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TBC1D4O60343 1298 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 TKTP29401 623 aaKnown RBP19.17■□□□□ 0.66
VPS52-214ENST00000463486 MRPL58Q14197 206 aaKnown RBP19.17■□□□□ 0.66
VPS52-214ENST00000463486 KIAA1841Q6NSI8 718 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 LLGL2Q6P1M3 1020 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 LILRA6Q6PI73 481 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 HS2ST1Q7LGA3 356 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 NT5DC4Q86YG4 428 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 SLC9A9Q8IVB4 645 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 SMYD4Q8IYR2 804 aaPredicted RBP19.17■□□□□ 0.66
VPS52-214ENST00000463486 GUF1Q8N442 669 aaKnown RBP19.17■□□□□ 0.66
VPS52-214ENST00000463486 XXYLT1Q8NBI6 393 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 BEST2Q8NFU1 509 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 BORCS6Q96GS4 357 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 EMILIN2Q9BXX0 1053 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 KIAA1586Q9HCI6 787 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 GRXCR2A6NFK2 248 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 XPOTO43592 962 aaKnown RBP19.16■□□□□ 0.66
VPS52-214ENST00000463486 TRAPPC3O43617 180 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 RPL17P18621 184 aaKnown RBP19.16■□□□□ 0.66
VPS52-214ENST00000463486 NDUFV1P49821 464 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 CYP2J2P51589 502 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 LILRA4P59901 499 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 SNRNP35Q16560 246 aaKnown RBP19.16■□□□□ 0.66
VPS52-214ENST00000463486 AAK1Q2M2I8 961 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 ZCWPW2Q504Y3 356 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 TJAP1Q5JTD0 557 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 ANKRD54Q6NXT1 300 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 EP400NLQ6ZTU2 488 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 SMRP1Q8NCR6 262 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 GOLGA5Q8TBA6 731 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 FEZF2Q8TBJ5 459 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 CCDC34Q96HJ3 373 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 MFSD14AQ96MC6 490 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.16■□□□□ 0.66
VPS52-214ENST00000463486 DPP3Q9NY33 737 aa19.16■□□□□ 0.66
VPS52-214ENST00000463486 KINO60870 393 aaKnown RBP19.15■□□□□ 0.66
VPS52-214ENST00000463486 C1RP00736 705 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 BMP6P22004 513 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 KLRC2P26717 231 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 CA8P35219 290 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 CYP24A1Q07973 514 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 CLUL1Q15846 466 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 COBLL1Q53SF7 1204 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 CEP57Q86XR8 500 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 C1orf127Q8N9H9 656 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 RDH13Q8NBN7 331 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 PLEKHO2Q8TD55 490 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 CCDC47Q96A33 483 aaKnown RBP19.15■□□□□ 0.66
VPS52-214ENST00000463486 MTRRQ9UBK8 725 aa19.15■□□□□ 0.66
VPS52-214ENST00000463486 SCN1AP35498 2009 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 SYN3O14994 580 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 MBTPS2O43462 519 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 PAPLNO95428 1278 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 MYBPC2Q14324 1141 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 PSMD6Q15008 389 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 PSMD5Q16401 504 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 NFIL3Q16649 462 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 ZNF658Q5TYW1 1059 aaPredicted RBP19.14■□□□□ 0.65
VPS52-214ENST00000463486 PTCRAQ6ISU1 281 aaPredicted RBP19.14■□□□□ 0.65
VPS52-214ENST00000463486 PPFIBP1Q86W92 1011 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 OR5B17Q8NGF7 314 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 CASP10Q92851 521 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 LMBRD1Q9NUN5 540 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 INTS13Q9NVM9 706 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 SIX4Q9UIU6 781 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 CD207Q9UJ71 328 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 NUB1Q9Y5A7 615 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 BACE2Q9Y5Z0 518 aa19.14■□□□□ 0.65
VPS52-214ENST00000463486 TGM5O43548 720 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 SMC2O95347 1197 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 NR3C1P04150 777 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 ADH1AP07327 375 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 PRCPP42785 496 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 CASP4P49662 377 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 MCCD1P59942 119 aaPredicted RBP19.13■□□□□ 0.65
VPS52-214ENST00000463486 TFAMQ00059 246 aaKnown RBP19.13■□□□□ 0.65
VPS52-214ENST00000463486 VARS2Q5ST30 1063 aaKnown RBP19.13■□□□□ 0.65
VPS52-214ENST00000463486 LMBRD2Q68DH5 695 aaPredicted RBP19.13■□□□□ 0.65
VPS52-214ENST00000463486 NOC3LQ8WTT2 800 aaKnown RBP19.13■□□□□ 0.65
VPS52-214ENST00000463486 SUSD6Q92537 303 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 ZNF516Q92618 1163 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 POP1Q99575 1024 aaKnown RBP19.13■□□□□ 0.65
VPS52-214ENST00000463486 RMND1Q9NWS8 449 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 MAN1B1Q9UKM7 699 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 PCDHB8Q9UN66 801 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 PLXNA3P51805 1871 aa19.13■□□□□ 0.65
VPS52-214ENST00000463486 EXOC3O60645 756 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 OAZ2O95190 189 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 IL9P15248 144 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 HOXB8P17481 243 aaPredicted RBP19.12■□□□□ 0.65
VPS52-214ENST00000463486 MCM4P33991 863 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 CLDN10P78369 228 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 CREMQ03060 361 aa19.12■□□□□ 0.65
VPS52-214ENST00000463486 SMAD4Q13485 552 aaKnown RBP19.12■□□□□ 0.65
VPS52-214ENST00000463486 SMAD2Q15796 467 aaKnown RBP19.12■□□□□ 0.65
VPS52-214ENST00000463486 PUS10Q3MIT2 529 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms