RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CLUL1Q15846 466 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 C4orf46Q504U0 113 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 PDCD4Q53EL6 469 aaKnown RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 CT83Q5H943 113 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 KCNK18Q7Z418 384 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 STRBPQ96SI9 672 aaKnown RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 CDC5LQ99459 802 aaKnown RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 POFUT1Q9H488 388 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 PTPRHQ9HD43 1115 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 ZNF277Q9NRM2 450 aaPredicted RBP5.24□□□□□ -1.57
USH2A-203ENST00000463147 SEMA4GQ9NTN9 838 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 POGKQ9P215 609 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 TUBD1Q9UJT1 453 aa5.24□□□□□ -1.57
USH2A-203ENST00000463147 MARCH11A6NNE9 402 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ERC2O15083 957 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 CDKL5O76039 1030 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 SPDEFO95238 335 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 CLEC2LP0C7M8 214 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ITGAMP11215 1152 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 AGXTP21549 392 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 PTH2RP49190 550 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 PTTG1IPP53801 180 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 RESTQ13127 1097 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 MORC3Q14149 939 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 TOR2AQ5JU69 321 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 LMBR1LQ6UX01 489 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 UNQ6494/PRO21346Q6UXR6 183 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 FRMD7Q6ZUT3 714 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ESPNLQ6ZVH7 1005 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 PDZD4Q76G19 769 aaPredicted RBP5.23□□□□□ -1.57
USH2A-203ENST00000463147 CHST15Q7LFX5 561 aaPredicted RBP5.23□□□□□ -1.57
USH2A-203ENST00000463147 CATIPQ7Z7H3 387 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 XYLT1Q86Y38 959 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ZFP28Q8NHY6 868 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ZNF384Q8TF68 577 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ASB10Q8WXI3 467 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ADAM2Q99965 735 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 SLC29A3Q9BZD2 475 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 GTPBP4Q9BZE4 634 aaKnown RBP5.23□□□□□ -1.57
USH2A-203ENST00000463147 INTUQ9ULD6 942 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 DAAM1Q9Y4D1 1078 aa5.23□□□□□ -1.57
USH2A-203ENST00000463147 ANO9A1A5B4 782 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 TBKBP1A7MCY6 615 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 ELL2O00472 640 aaPredicted RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 PMM2O15305 246 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 RBMXL2O75526 392 aaKnown RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 SEC24DO94855 1032 aaPredicted RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 ZFPL1O95159 310 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 PCDH8O95206 1070 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 OSMP13725 252 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 PAX3P23760 479 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 AKAP5P24588 427 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 HTR3AP46098 478 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 RARRES1P49788 294 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 ZNF169Q14929 603 aaPredicted RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 SAFBQ15424 915 aaKnown RBP eCLIP5.22□□□□□ -1.57
USH2A-203ENST00000463147 ATAT1Q5SQI0 421 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 IFIT1BQ5T764 474 aaKnown RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 KIAA1614Q5VZ46 1190 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 C11orf96Q7Z7L8 435 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 MORC1Q86VD1 984 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 PPP1R35Q8TAP8 253 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 PARD3BQ8TEW8 1205 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 RSAD2Q8WXG1 361 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 EAF2Q96CJ1 260 aaPredicted RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 ACO2Q99798 780 aaKnown RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 C1QTNF7Q9BXJ2 289 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 NAA15Q9BXJ9 866 aaKnown RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 PCGF6Q9BYE7 350 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 ANO3Q9BYT9 981 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 ALG13Q9NP73 1137 aaKnown RBP5.22□□□□□ -1.57
USH2A-203ENST00000463147 DNAJC28Q9NX36 388 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 RNF7Q9UBF6 113 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 MSRAQ9UJ68 235 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 EDARQ9UNE0 448 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 ATP11BQ9Y2G3 1177 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 MRFAP1Q9Y605 127 aa5.22□□□□□ -1.57
USH2A-203ENST00000463147 DNAJC9-AS1A6NH13 148 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 CTNND1O60716 968 aaKnown RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 POU2F2P09086 479 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 IFIT2P09913 472 aaKnown RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 NBPF7P0C2Y1 421 aaPredicted RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 SLC5A1P13866 664 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 PHKG2P15735 406 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 PLA2G5P39877 138 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 CACNA2D1P54289 1103 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 MANFP55145 182 aaKnown RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 ZNF280AP59817 542 aaPredicted RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 MEF2AQ02078 507 aaPredicted RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 ZBTB41Q5SVQ8 909 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 OVCH2Q7RTZ1 564 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 SKAP1Q86WV1 359 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 SYT12Q8IV01 421 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 GLB1L2Q8IW92 636 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 AMOTL1Q8IY63 956 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 SLC44A3Q8N4M1 653 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 GAB3Q8WWW8 586 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 TFAP2CQ92754 450 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 HPS3Q969F9 1004 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms