RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 TRIM7Q9C029 511 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 XYLT2Q9H1B5 865 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 ERVK-5Q9HDB9 667 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 MAGEB2O15479 319 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 MMP3P08254 477 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 CXCL8P10145 99 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 HOXD8P13378 290 aaPredicted RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 RRM1P23921 792 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 NOMO3P69849 1222 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 TFAMQ00059 246 aaKnown RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 FAM187BQ17R55 369 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 MON1BQ7L1V2 547 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 ADAT2Q7Z6V5 191 aaKnown RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 PASD1Q8IV76 773 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 ZDHHC14Q8IZN3 488 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 CAVIN3Q969G5 261 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 WNT8AQ9H1J5 351 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 PRMT7Q9NVM4 692 aaPredicted RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 AMACRQ9UHK6 382 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 CPA4Q9UI42 421 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 PCNTO95613 3336 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 DOCK3Q8IZD9 2030 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 COL1A2P08123 1366 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 PYGMP11217 842 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 ECHS1P30084 290 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 PHKA2P46019 1235 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 PTP4A2Q12974 167 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 SURF1Q15526 300 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 SGSM1Q2NKQ1 1148 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 PRAMEF19Q5SWL8 479 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 EMBQ6PCB8 327 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 CPB2Q96IY4 423 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 ABHD16BQ9H3Z7 469 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 PDZD7Q9H5P4 517 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 AVENQ9NQS1 362 aaPredicted RBP10.86□□□□□ -0.67
MSH5-211ENST00000463144 ZHX1Q9UKY1 873 aaPredicted RBP10.86□□□□□ -0.67
MSH5-211ENST00000463144 AKT3Q9Y243 479 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 PCDHA3Q9Y5H8 950 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
MSH5-211ENST00000463144 SLC15A5A6NIM6 579 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 LACTBL1A8MY62 500 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 THAP12O43422 761 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 CTNNA2P26232 953 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 MAPK4P31152 587 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
MSH5-211ENST00000463144 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 DDX42Q86XP3 938 aaKnown RBP eCLIP10.86□□□□□ -0.672e-6■□□□□ 8.3
MSH5-211ENST00000463144 UBL4BQ8N7F7 174 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 OR6J1Q8NGC5 347 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 RIN2Q8WYP3 895 aaPredicted RBP10.86□□□□□ -0.67
MSH5-211ENST00000463144 CCDC102AQ96A19 550 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 CELF4Q9BZC1 486 aaKnown RBP10.86□□□□□ -0.67
MSH5-211ENST00000463144 IMPG2Q9BZV3 1241 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 CISHQ9NSE2 258 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 SIX4Q9UIU6 781 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
MSH5-211ENST00000463144 ZNF236Q9UL36 1845 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 IGF2BP3O00425 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
MSH5-211ENST00000463144 TTI1O43156 1089 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 CLSTN1O94985 981 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 NFICP08651 508 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 WEE2P0C1S8 567 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 TMEM191BP0C7N4 346 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 STAG3L1P0CL83 205 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 ARF4P18085 180 aaPredicted RBP10.85□□□□□ -0.67
MSH5-211ENST00000463144 CD58P19256 250 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 GGCXP38435 758 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 ASPAP45381 313 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 NSFP46459 744 aaKnown RBP10.85□□□□□ -0.67
MSH5-211ENST00000463144 PAK2Q13177 524 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 GPS2Q13227 327 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 TRPC3Q13507 836 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 GRIK4Q16099 956 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 MORN1Q5T089 497 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 IQSEC1Q6DN90 963 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 TRIM72Q6ZMU5 477 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 KIAA0319LQ8IZA0 1049 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 CXorf38Q8TB03 319 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 PPP1R13LQ8WUF5 828 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 NIF3L1Q9GZT8 377 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 RPF1Q9H9Y2 349 aaKnown RBP10.85□□□□□ -0.67
MSH5-211ENST00000463144 FLRT1Q9NZU1 646 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 FAN1Q9Y2M0 1017 aa10.85□□□□□ -0.67
MSH5-211ENST00000463144 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 SPOPO43791 374 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 ITGBL1O95965 494 aaPredicted RBP10.84□□□□□ -0.67
MSH5-211ENST00000463144 MCF2P10911 925 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 IRX5P78411 483 aaPredicted RBP10.84□□□□□ -0.67
MSH5-211ENST00000463144 PPFIA1Q13136 1202 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 NNTQ13423 1086 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 GLIPR1L2Q4G1C9 344 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 ZNF394Q53GI3 561 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 PHF13Q86YI8 300 aaPredicted RBP10.84□□□□□ -0.67
MSH5-211ENST00000463144 PRELID2Q8N945 189 aa10.84□□□□□ -0.67
MSH5-211ENST00000463144 C1orf127Q8N9H9 656 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms