RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 MAGEF1Q9HAY2 307 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 XPNPEP3Q9NQH7 507 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 Q9Y3F1 56 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 MEIS1O00470 390 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 RHOBTB3O94955 611 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 ZFXP17010 805 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 SMPD1P17405 629 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 TRAPPC10P48553 1259 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 DRG2P55039 364 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 ATP2C1P98194 919 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 MUM1Q2TAK8 710 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 LETM2Q2VYF4 491 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 LHX8Q68G74 356 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 MFSD5Q6N075 450 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 CCDC62Q6P9F0 684 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 MDM1Q8TC05 714 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 U2AF1L4Q8WU68 220 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 C17orf50Q8WW18 174 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 RSPH1Q8WYR4 309 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 PABPC3Q9H361 631 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 STK38LQ9Y2H1 464 aa12.22□□□□□ -0.45
TRAPPC3-205ENST00000462715 CYP3A7-CYP3A51PA0A087WV96 503 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 A8MUI8 341 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 FAM86B1E9PN63 330 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 BACH1O14867 736 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 CEP104O60308 925 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 TJP3O95049 919 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 SGPL1O95470 568 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 OATP04181 439 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 PDHA1P08559 390 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 FAM86B2P0C5J1 330 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 CYP3A7P24462 503 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 CCNE1P24864 410 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 GJA8P48165 433 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 PTDSS1P48651 473 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 CACNA2D1P54289 1103 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 CNGA2Q16280 664 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 FOXR2Q6PJQ5 311 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 ARRDC4Q8NCT1 418 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 SENP7Q9BQF6 1050 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 CENPKQ9BS16 269 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 PCDH18Q9HCL0 1135 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 SUN2Q9UH99 717 aa12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 TTC7AQ9ULT0 858 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 UTP11Q9Y3A2 253 aaKnown RBP12.21□□□□□ -0.45
TRAPPC3-205ENST00000462715 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 PGRMC1O00264 195 aaKnown RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 ARIH2O95376 493 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 GH1P01241 217 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 PHEXP78562 749 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 MAP7Q14244 749 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 LY6KQ17RY6 165 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 PRR16Q569H4 304 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 BRDTQ58F21 947 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 EARS2Q5JPH6 523 aaKnown RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 RNF180Q86T96 592 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 ALDH16A1Q8IZ83 802 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 NEK9Q8TD19 979 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 GFM2Q969S9 779 aaKnown RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 LENG1Q96BZ8 264 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZNF653Q96CK0 615 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 NUDCD1Q96RS6 583 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 PRMT1Q99873 361 aaKnown RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.461e-7■■■■■ 27.7
TRAPPC3-205ENST00000462715 SPATA16Q9BXB7 569 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 CARD9Q9H257 536 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 TLE6Q9H808 572 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 PREBQ9HCU5 417 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 KCNH7Q9NS40 1196 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 KLHL14Q9P2G3 628 aa12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 NKX1-2Q9UD57 310 aaPredicted RBP12.21□□□□□ -0.46
TRAPPC3-205ENST00000462715 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 MAP3K13O43283 966 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 ADCY6O43306 1168 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 CCNT1O60563 726 aaKnown RBP12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 PALMO75781 387 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 FGFR1OPO95684 399 aaKnown RBP12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 CPA3P15088 417 aa12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 UBA1P22314 1058 aaKnown RBP12.2□□□□□ -0.46
TRAPPC3-205ENST00000462715 ATP5DP30049 168 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms