RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 VN1R2Q8NFZ6 395 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 MICAL1Q8TDZ2 1067 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 NOC3LQ8WTT2 800 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 PPM1EQ8WY54 764 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 PABPC5Q96DU9 382 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 DHTKD1Q96HY7 919 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 TTPALQ9BTX7 342 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 TLE6Q9H808 572 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 MRPL17Q9NRX2 175 aaKnown RBP13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 SIX4Q9UIU6 781 aa13.12□□□□□ -0.31
ERGIC3-211ENST00000461043 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 I3L4J1 428 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 PER2O15055 1255 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 SPTLC1O15269 473 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 CLASP2O75122 1294 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 GLP2RO95838 553 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 MBD3O95983 291 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 CNPP09543 421 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 PAX3P23760 479 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 CCNE1P24864 410 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 MCM4P33991 863 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 LTBRP36941 435 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 LILRA4P59901 499 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 TFAMQ00059 246 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 ENPEPQ07075 957 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 ADAM15Q13444 863 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 MRPL58Q14197 206 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 C1orf220Q5T0J3 134 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 LMBRD2Q68DH5 695 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 ANKRD40Q6AI12 368 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 TMEM184AQ6ZMB5 413 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 CACTINQ8WUQ7 758 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 BORCS6Q96GS4 357 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 KLHL5Q96PQ7 755 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 CGRRF1Q99675 332 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 PRDM6Q9NQX0 595 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
ERGIC3-211ENST00000461043 TRIM49BA6NDI0 452 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 PSMA7O14818 248 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 SYN3O14994 580 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 LINC01565O15544 149 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 C1RP00736 705 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 TKTP29401 623 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 ADAM9Q13443 819 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 STIM1Q13586 685 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 BMS1Q14692 1282 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 RBM23Q86U06 439 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 LRRC52Q8N7C0 313 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 DUSP9Q99956 384 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 UBE2ZQ9H832 354 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 COG5Q9UP83 839 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 NUB1Q9Y5A7 615 aa13.1□□□□□ -0.31
ERGIC3-211ENST00000461043 C2CD2LO14523 706 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 TEX28O15482 410 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 TBX10O75333 385 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 ITGB3P05106 788 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 DLATP10515 647 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 POLR2BP30876 1174 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 CLCN4P51793 760 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 DLG4P78352 724 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 CREMQ03060 361 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 PSMD5Q16401 504 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
ERGIC3-211ENST00000461043 KIAA1841Q6NSI8 718 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms