RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PIK3R5Q8WYR1 880 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 FAM84AQ96KN4 292 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 MFSD14AQ96MC6 490 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 TTPALQ9BTX7 342 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 CLEC1BQ9P126 229 aa22.32■■□□□ 1.16
RPUSD3-210ENST00000460909 VCANP13611 3396 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 FSD2A1L4K1 749 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 EXOC3O60645 756 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 NR3C1P04150 777 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 CYP24A1Q07973 514 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 SCARA3Q6AZY7 606 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 PRSS55Q6UWB4 352 aaPredicted RBP22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 SLC22A17Q8WUG5 538 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 SUSD3Q96L08 255 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 GTPBP4Q9BZE4 634 aaKnown RBP22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 FNIP2Q9P278 1114 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 NUB1Q9Y5A7 615 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 HCFC2Q9Y5Z7 792 aa22.31■■□□□ 1.16
RPUSD3-210ENST00000460909 TEX28O15482 410 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 CALUO43852 315 aaPredicted RBP22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 KCNA5P22460 613 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 TKTP29401 623 aaKnown RBP22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 CASP4P49662 377 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 TFAMQ00059 246 aaKnown RBP22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 MORC3Q14149 939 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 PSMD6Q15008 389 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 SURF1Q15526 300 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 CAMK4Q16566 473 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 ISM2Q6H9L7 571 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 CEP57Q86XR8 500 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 ADSSL1Q8N142 457 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 C1orf127Q8N9H9 656 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 ATXN2LQ8WWM7 1075 aaKnown RBP22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 MSLNLQ96KJ4 702 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 EMILIN2Q9BXX0 1053 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 INTS13Q9NVM9 706 aa22.3■■□□□ 1.16
RPUSD3-210ENST00000460909 PLXNA3P51805 1871 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 M0QZQ0 153 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 SPTLC1O15269 473 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 CD44P16070 742 aaKnown RBP22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 LILRA4P59901 499 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 LMBRD2Q68DH5 695 aaPredicted RBP22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 CENPPQ6IPU0 288 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 OR5B17Q8NGF7 314 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 PLEKHO2Q8TD55 490 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 CACTINQ8WUQ7 758 aaKnown RBP22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 KIAA1468Q9P260 1216 aa22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 BARX2Q9UMQ3 279 aaPredicted RBP22.29■■□□□ 1.16
RPUSD3-210ENST00000460909 H3BQ06 376 aaPredicted RBP22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 SYN3O14994 580 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 EPCAMP16422 314 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 RPL17P18621 184 aaKnown RBP22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 KLRC2P26717 231 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 MCM4P33991 863 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 CLCN4P51793 760 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 MRPL58Q14197 206 aaKnown RBP22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 PSMD5Q16401 504 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 LEXMQ3ZCV2 418 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 LLGL2Q6P1M3 1020 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 EP400NLQ6ZTU2 488 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 WDR49Q8IV35 697 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 BORCS6Q96GS4 357 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 POP1Q99575 1024 aaKnown RBP22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 CLSTN3Q9BQT9 956 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 MTMR12Q9C0I1 747 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 CLSTN2Q9H4D0 955 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 SIX4Q9UIU6 781 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 C5orf42Q9H799 3197 aa22.28■■□□□ 1.16
RPUSD3-210ENST00000460909 ITGB3P05106 788 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PAX3P23760 479 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 NR2F2P24468 414 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 NDUFV1P49821 464 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PMS1P54277 932 aaKnown RBP22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 MRPS5P82675 430 aaKnown RBP22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 EDRF1Q3B7T1 1238 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PDXDC1Q6P996 788 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PPFIBP1Q86W92 1011 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 GPT2Q8TD30 523 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PARD3BQ8TEW8 1205 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 CCDC127Q96BQ5 260 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 CGRRF1Q99675 332 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 MTRRQ9UBK8 725 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 ITGA11Q9UKX5 1188 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PCDHB8Q9UN66 801 aa22.27■■□□□ 1.16
RPUSD3-210ENST00000460909 PPP1R3GB7ZBB8 358 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 TULP1O00294 542 aaPredicted RBP22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 BIN1O00499 593 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 MAPK13O15264 365 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 ADAM12O43184 909 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 TBC1D4O60343 1298 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 ADH1AP07327 375 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 DLATP10515 647 aaKnown RBP22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 POLR2BP30876 1174 aaKnown RBP22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 KCNQ1P51787 676 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 CLDN10P78369 228 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 CREMQ03060 361 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 DUOXA2Q1HG44 320 aa22.26■■□□□ 1.15
RPUSD3-210ENST00000460909 VARS2Q5ST30 1063 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms