RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 KRT19P08727 400 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 SKILP12757 684 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 POLR2BP30876 1174 aaKnown RBP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 MLH1P40692 756 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 STAT1P42224 750 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 MFAP3P55082 362 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 NOP14P78316 857 aaKnown RBP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 CDK17Q00537 523 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 MEA1Q16626 185 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 ARHGAP44Q17R89 818 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 SFMBT2Q5VUG0 894 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 SPOPLQ6IQ16 392 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 TMTC1Q8IUR5 882 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 TMEM130Q8N3G9 435 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 RNF169Q8NCN4 708 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 KAT5Q92993 513 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 JAKMIP2Q96AA8 810 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 ELMO3Q96BJ8 720 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 RPS6KC1Q96S38 1066 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 GPR88Q9GZN0 384 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 VRTNQ9H8Y1 702 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 SLC38A7Q9NVC3 462 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 ZNHIT6Q9NWK9 470 aaKnown RBP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 TMEM161AQ9NX61 479 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 TUBGCP4Q9UGJ1 667 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 AGAP1Q9UPQ3 857 aa11.72□□□□□ -0.53
CSDC2-202ENST00000460790 R3HCC1Q9Y3T6 440 aaKnown RBP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
CSDC2-202ENST00000460790 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 F8VZ95 297 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 PIRO00625 290 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 NRDCO43847 1150 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 TBXAS1P24557 533 aaPredicted RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 LRPAP1P30533 357 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 SOX5P35711 763 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 AFF1P51825 1210 aaKnown RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 SOX4Q06945 474 aaPredicted RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 CUL2Q13617 745 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 IKBKEQ14164 716 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 NAB2Q15742 525 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 ZNF699Q32M78 642 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 C9orf57Q5W0N0 161 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 E4F1Q66K89 784 aaPredicted RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 IRF2BP2Q7Z5L9 587 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 RPUSD2Q8IZ73 545 aaKnown RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 TMEM199Q8N511 208 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 SHC3Q92529 594 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 HPDLQ96IR7 371 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 CHP1Q99653 195 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 PCDHB7Q9Y5E2 793 aa11.71□□□□□ -0.53
CSDC2-202ENST00000460790 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.53
CSDC2-202ENST00000460790 LTBP2Q14767 1821 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 ABHD14A-ACY1A0A1B0GW23 586 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 SERPING1P05155 500 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 CSF2RAP15509 400 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 FERP16591 822 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 IBSPP21815 317 aaPredicted RBP11.7□□□□□ -0.54
CSDC2-202ENST00000460790 SCNN1GP51170 649 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 MYO1EQ12965 1108 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 HGSNATQ68CP4 663 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 CYP26C1Q6V0L0 522 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 FMNL3Q8IVF7 1028 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 LRRC52Q8N7C0 313 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
CSDC2-202ENST00000460790 KANSL3Q9P2N6 904 aa11.7□□□□□ -0.54
CSDC2-202ENST00000460790 PPEF2O14830 753 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 ARHGAP6O43182 974 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 GFPT2O94808 682 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 POMCP01189 267 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 PFKMP08237 780 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 PNMA6AP0CW24 399 aaPredicted RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 P4HA1P13674 534 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 ACO1P21399 889 aaKnown RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 RPL9P32969 192 aaKnown RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 PRKCIP41743 596 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 GRIK3Q13003 919 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 ASIC2Q16515 512 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 NOMO2Q5JPE7 1267 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 UBR7Q8N806 425 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 ARID3AQ99856 593 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 BCO2Q9BYV7 579 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 NIF3L1Q9GZT8 377 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 NHEJ1Q9H9Q4 299 aaPredicted RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 GOLGA2P5Q9HBQ8 144 aa11.69□□□□□ -0.54
CSDC2-202ENST00000460790 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
CSDC2-202ENST00000460790 ARHGAP20Q9P2F6 1191 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms