RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 PRSS23O95084 383 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 SCAF4O95104 1147 aaKnown RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 ZBED1O96006 694 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 MYL1P05976 194 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 GJB1P08034 283 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 RHCEP18577 417 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 CACNB3P54284 484 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 RNASE9P60153 205 aaKnown RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 GPSM2P81274 684 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 RHDQ02161 417 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 METTL24Q5JXM2 366 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 RNF220Q5VTB9 566 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 MAEAQ7L5Y9 396 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 CHST15Q7LFX5 561 aaPredicted RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 FAM90A1Q86YD7 464 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 SYT12Q8IV01 421 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 SLC17A8Q8NDX2 589 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 IMPG2Q9BZV3 1241 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 ZMAT3Q9HA38 289 aaKnown RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 SIDT1Q9NXL6 827 aaKnown RBP5.94□□□□□ -1.46
VBP1-202ENST00000460509 TRPM5Q9NZQ8 1165 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 JKAMPQ9P055 326 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 L1RE1Q9UN81 338 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 XDHP47989 1333 aa5.94□□□□□ -1.46
VBP1-202ENST00000460509 ZNF785A8K8V0 405 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 FAM20BO75063 409 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 RECQL4O94761 1208 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 NBPF7P0C2Y1 421 aaPredicted RBP5.93□□□□□ -1.46
VBP1-202ENST00000460509 HDCP19113 662 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 BUD31P41223 144 aaPredicted RBP5.93□□□□□ -1.46
VBP1-202ENST00000460509 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 GALEQ14376 348 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 HLTFQ14527 1009 aaKnown RBP eCLIP5.93□□□□□ -1.46
VBP1-202ENST00000460509 NOMO2Q5JPE7 1267 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 ZNF365Q70YC5 407 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 KIAA0319LQ8IZA0 1049 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 TTC9BQ8N6N2 239 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 CPT1CQ8TCG5 803 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 APOL5Q9BWW9 433 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 RSAD1Q9HA92 442 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 CFAP97Q9P2B7 532 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 CNOT11Q9UKZ1 510 aaKnown RBP5.93□□□□□ -1.46
VBP1-202ENST00000460509 ATP11BQ9Y2G3 1177 aa5.93□□□□□ -1.46
VBP1-202ENST00000460509 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
VBP1-202ENST00000460509 ZNF185O15231 689 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 PHGDHO43175 533 aaKnown RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 MGEA5O60502 916 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 PQBP1O60828 265 aaKnown RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 GNAI2P04899 355 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 CKBP12277 381 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 ACRV1P26436 265 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 SLC7A1P30825 629 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 MAGEA10P43363 369 aaPredicted RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 SOX8P57073 446 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 FAM193AP78312 1265 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 SAFBQ15424 915 aaKnown RBP eCLIP5.92□□□□□ -1.46
VBP1-202ENST00000460509 NRN1LQ496H8 165 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 USP39Q53GS9 565 aaKnown RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 SWSAP1Q6NVH7 229 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 C1orf210Q8IVY1 113 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 LRTOMTQ8WZ04 291 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 EXTL1Q92935 676 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 DVL3Q92997 716 aaPredicted RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 MARS2Q96GW9 593 aaKnown RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 CDK5RAP1Q96SZ6 601 aaKnown RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 SARGQ9BW04 601 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 BHMT2Q9H2M3 363 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 PIH1D1Q9NWS0 290 aaKnown RBP5.92□□□□□ -1.46
VBP1-202ENST00000460509 TPCN1Q9ULQ1 816 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 CDYLQ9Y232 598 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 AATKQ6ZMQ8 1374 aa5.92□□□□□ -1.46
VBP1-202ENST00000460509 GOLIM4O00461 696 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 PLIN1O60240 522 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 MATN4O95460 622 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 MAP4K4O95819 1239 aaPredicted RBP5.91□□□□□ -1.46
VBP1-202ENST00000460509 PEX2P28328 305 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 ZNF135P52742 658 aaPredicted RBP5.91□□□□□ -1.46
VBP1-202ENST00000460509 MAP9Q49MG5 647 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 SPDYAQ5MJ70 313 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 TMIEQ8NEW7 156 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 DCLRE1CQ96SD1 692 aaKnown RBP5.91□□□□□ -1.46
VBP1-202ENST00000460509 P2RX7Q99572 595 aaKnown RBP5.91□□□□□ -1.46
VBP1-202ENST00000460509 ZSWIM1Q9BR11 485 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 ARNT2Q9HBZ2 717 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 FAM30AQ9NZY2 134 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 ZDHHC8Q9ULC8 765 aa5.91□□□□□ -1.46
VBP1-202ENST00000460509 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 APAF1O14727 1248 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 ERN1O75460 977 aaKnown RBP5.9□□□□□ -1.46
VBP1-202ENST00000460509 RPS6KA4O75676 772 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 SPATA31D3P0C874 917 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 RARBP10826 455 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 TRIM27P14373 513 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 ZNF20P17024 532 aa5.9□□□□□ -1.46
VBP1-202ENST00000460509 KIF22Q14807 665 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms