RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 DUPD1Q68J44 220 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 ZNF571Q7Z3V5 609 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-203ENST00000460097 NT5DC3Q86UY8 548 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 SESTD1Q86VW0 696 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 NT5C3AQ9H0P0 336 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 ZDHHC18Q9NUE0 388 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 SAMD15Q9P1V8 674 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
CMTM3-203ENST00000460097 C15orf41Q9Y2V0 281 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 MAFBQ9Y5Q3 323 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-203ENST00000460097 NCANO14594 1321 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 H2AFZP0C0S5 128 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 FLT3P36888 993 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 ADCY2Q08462 1091 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 SPIRE1Q08AE8 756 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 GRIK3Q13003 919 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 PPP1R7Q15435 360 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 HIBCHQ6NVY1 386 aaPredicted RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 ALKBH5Q6P6C2 394 aaKnown RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 H2AFVQ71UI9 128 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 TRPM8Q7Z2W7 1104 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 DDX47Q9H0S4 455 aaKnown RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 CARD9Q9H257 536 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 NOP53Q9NZM5 478 aaKnown RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 GTPBP10A4D1E9 387 aaKnown RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 CETN3O15182 167 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 TLR3O15455 904 aaKnown RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
CMTM3-203ENST00000460097 EPHA7Q15375 998 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 DYMQ7RTS9 669 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 ERP44Q9BS26 406 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 EPB41L4BQ9H329 900 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 HOMER3Q9NSC5 361 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 PARP2Q9UGN5 583 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 AMACRQ9UHK6 382 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 GTF2IRD1Q9UHL9 959 aa16.84■□□□□ 0.29
CMTM3-203ENST00000460097 BUB1BO60566 1050 aaPredicted RBP16.83■□□□□ 0.28
CMTM3-203ENST00000460097 OAS1P00973 400 aaKnown RBP16.83■□□□□ 0.28
CMTM3-203ENST00000460097 MMEP08473 750 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 SMIM10L2AP0DMW4 78 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 SMIM10L2BP0DMW5 78 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 CHN1P15882 459 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 CCND1P24385 295 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 GALNTL6Q49A17 601 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 C7orf61Q8IZ16 206 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 ATP6V0A1Q93050 837 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 AP1M1Q9BXS5 423 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 TRPV6Q9H1D0 765 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 PANK4Q9NVE7 773 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 TRPC6Q9Y210 931 aa16.83■□□□□ 0.28
CMTM3-203ENST00000460097 POTEB3A0JP26 581 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 C17orf102A2RUQ5 167 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 O00370 1275 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 TTI1O43156 1089 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 B4GALT4O60513 344 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 WFS1O76024 890 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 CD4P01730 458 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 P4HBP07237 508 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 GNAT1P11488 350 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 UCHL3P15374 230 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 ATP4AP20648 1035 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 PDE6CP51160 858 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 DNA2P51530 1060 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 JAM2P57087 298 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 RNASE9P60153 205 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 FAAP100Q0VG06 881 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 KCNH2Q12809 1159 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 GDF6Q6KF10 455 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 MFSD5Q6N075 450 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 POTEBQ6S5H4 581 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 TRMT13Q9NUP7 481 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 AMFRQ9UKV5 643 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 TRAF3IP3Q9Y228 551 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 NR2E3Q9Y5X4 410 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 CAND2O75155 1236 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 CLTBP09497 229 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 SKIV2L2P42285 1042 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 PMS2P54278 862 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 PSMC5P62195 406 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 E2F5Q15329 346 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 DENND2CQ68D51 928 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 ROPN1BQ9BZX4 212 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 ROPN1Q9HAT0 212 aaPredicted RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 METTL14Q9HCE5 456 aaKnown RBP16.82■□□□□ 0.28
CMTM3-203ENST00000460097 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 RASAL2Q9UJF2 1139 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 NOD1Q9Y239 953 aa16.82■□□□□ 0.28
CMTM3-203ENST00000460097 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
CMTM3-203ENST00000460097 POTEMA6NI47 508 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms