RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 KCNG4Q8TDN1 519 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 TNMDQ9H2S6 317 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 MAFFQ9ULX9 164 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 PCDHB8Q9UN66 801 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 PCDHB13Q9Y5F0 798 aa19.42■□□□□ 0.7
MSH6-207ENST00000456246 DOCK8Q8NF50 2099 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 ARHGEF37A1IGU5 675 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 FRMD3A2A2Y4 597 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 LACTBL1A8MY62 500 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 CUTAO60888 179 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 F13A1P00488 732 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 IDEP14735 1019 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 ELF1P32519 619 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 AARSP49588 968 aaKnown RBP eCLIP19.41■□□□□ 0.78e-6■■■■■ 52.4
MSH6-207ENST00000456246 ROR1Q01973 937 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 TPGS2Q68CL5 300 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 RSPO2Q6UXX9 243 aaPredicted RBP19.41■□□□□ 0.7
MSH6-207ENST00000456246 ACCSQ96QU6 501 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 STRA6Q9BX79 667 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 KCNK12Q9HB15 430 aa19.41■□□□□ 0.7
MSH6-207ENST00000456246 AGO2Q9UKV8 859 aaKnown RBP19.41■□□□□ 0.7
MSH6-207ENST00000456246 M0QZQ0 153 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 TBC1D4O60343 1298 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 N4BP1O75113 896 aaKnown RBP19.4■□□□□ 0.7
MSH6-207ENST00000456246 GCNT3O95395 438 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 FSHRP23945 695 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 AMPD3Q01432 767 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 CTXN3Q4LDR2 81 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 ZBTB41Q5SVQ8 909 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 L1TD1Q5T7N2 865 aaKnown RBP19.4■□□□□ 0.7
MSH6-207ENST00000456246 SPATA1Q5VX52 437 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 STXBP4Q6ZWJ1 553 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 GET4Q7L5D6 327 aaPredicted RBP19.4■□□□□ 0.7
MSH6-207ENST00000456246 CCDC65Q8IXS2 484 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 POMGNT1Q8WZA1 660 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 PANK4Q9NVE7 773 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 TFIP11Q9UBB9 837 aaKnown RBP19.4■□□□□ 0.7
MSH6-207ENST00000456246 DUSP12Q9UNI6 340 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 C2CD2Q9Y426 696 aa19.4■□□□□ 0.7
MSH6-207ENST00000456246 A0A087X0B3 334 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 ANKRD63C9JTQ0 380 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 ABLIM3O94929 683 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 LAMP2P13473 410 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 ATF2P15336 505 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 YWHAHQ04917 246 aaPredicted RBP19.39■□□□□ 0.69
MSH6-207ENST00000456246 SPAG1Q07617 926 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 TMEM132DQ14C87 1099 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 JADE1Q6IE81 842 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 GRASPQ7Z6J2 395 aaPredicted RBP19.39■□□□□ 0.69
MSH6-207ENST00000456246 NT5DC4Q86YG4 428 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 PDILTQ8N807 584 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 IQUBQ8NA54 791 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 FAM212AQ96EL1 285 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 MYADMQ96S97 322 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 PANK2Q9BZ23 570 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 TMEM206Q9H813 350 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 MAGEF1Q9HAY2 307 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 KBTBD4Q9NVX7 518 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 KCNH3Q9ULD8 1083 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 POLIQ9UNA4 740 aa19.39■□□□□ 0.69
MSH6-207ENST00000456246 WDR27A2RRH5 827 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 PRRG1O14668 218 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 CCL16O15467 120 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 OAZ2O95190 189 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 IL18RAPO95256 599 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 LDHAP00338 332 aaKnown RBP19.38■□□□□ 0.69
MSH6-207ENST00000456246 LRG1P02750 347 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 NUBP1P53384 320 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 USP37Q86T82 979 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 TCEAL8Q8IYN2 117 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 PYM1Q9BRP8 204 aaKnown RBP19.38■□□□□ 0.69
MSH6-207ENST00000456246 CDH7Q9ULB5 785 aa19.38■□□□□ 0.69
MSH6-207ENST00000456246 TYMPP19971 482 aa19.37■□□□□ 0.69
MSH6-207ENST00000456246 GARTP22102 1010 aa19.37■□□□□ 0.69
MSH6-207ENST00000456246 ACOT2P49753 483 aa19.37■□□□□ 0.69
MSH6-207ENST00000456246 E2F4Q16254 413 aa19.37■□□□□ 0.69
MSH6-207ENST00000456246 PABPC1LQ4VXU2 614 aaKnown RBP19.37■□□□□ 0.69
MSH6-207ENST00000456246 DSTYKQ6XUX3 929 aa19.37■□□□□ 0.69
MSH6-207ENST00000456246 SYCP3Q8IZU3 236 aa19.37■□□□□ 0.69
MSH6-207ENST00000456246 AVENQ9NQS1 362 aaPredicted RBP19.37■□□□□ 0.69
MSH6-207ENST00000456246 AFF4Q9UHB7 1163 aaKnown RBP19.37■□□□□ 0.69
MSH6-207ENST00000456246 OR6C75A6NL08 312 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 ANHXE9PGG2 379 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 KIAA0391O15091 583 aaKnown RBP19.36■□□□□ 0.69
MSH6-207ENST00000456246 NFICP08651 508 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 ODC1P11926 461 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 CPB1P15086 417 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 ADSSP30520 456 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 ARPP19P56211 112 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 FOXD4L5Q5VV16 416 aaPredicted RBP19.36■□□□□ 0.69
MSH6-207ENST00000456246 CNNM4Q6P4Q7 775 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 MTSS1LQ765P7 747 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 FOXD4L4Q8WXT5 416 aaPredicted RBP19.36■□□□□ 0.69
MSH6-207ENST00000456246 DHX58Q96C10 678 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 TRIM9Q9C026 710 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 MFSD1Q9H3U5 465 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 CYP4F11Q9HBI6 524 aa19.36■□□□□ 0.69
MSH6-207ENST00000456246 FAM13BQ9NYF5 915 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms