RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 LIG3P49916 1009 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 FMO1Q01740 532 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CENPCQ03188 943 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ITIH4Q14624 930 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 PGM5Q15124 567 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CCL14Q16627 93 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 Q3C1V9 767 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 BRDTQ58F21 947 aaPredicted RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 TNFAIP8L3Q5GJ75 292 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 GPR142Q7Z601 462 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ANKS4BQ8N8V4 417 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 SLC20A1Q8WUM9 679 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 ZNF653Q96CK0 615 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 PLCD4Q9BRC7 762 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CBWD1Q9BRT8 395 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 NUP85Q9BW27 656 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 KDM4CQ9H3R0 1056 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 A1CFQ9NQ94 594 aaKnown RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 RAB20Q9NX57 234 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 TAS2R14Q9NYV8 317 aa11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
GTF3C2-206ENST00000454704 TCEA3O75764 348 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 DGAT1O75907 488 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 GAS8O95995 478 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CNGA1P29973 690 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CCND2P30279 289 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 FLT3P36888 993 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CETN2P41208 172 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 RGS2P41220 211 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PLTPP55058 493 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PEX3P56589 373 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 DLG4P78352 724 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 MRPS9P82933 396 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 LMNB2Q03252 620 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 MESDQ14696 234 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CLEC16AQ2KHT3 1053 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 MORN1Q5T089 497 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 TTC19Q6DKK2 380 aaPredicted RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 Q7L0L9 218 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PLEKHH3Q7Z736 793 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 NOP9Q86U38 636 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 RPAINQ86UA6 219 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PPM1KQ8N3J5 372 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 DEFB123Q8N688 67 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 TMEM161BQ8NDZ6 487 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 FBXO25Q8TCJ0 367 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CCHCR1Q8TD31 782 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 GTF3C2Q8WUA4 911 aaPredicted RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 RAPGEF5Q92565 580 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 USP6NLQ92738 828 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 SERPINB12Q96P63 405 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 APBA2Q99767 749 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 MOV10L1Q9BXT6 1211 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 ERVK-5Q9HDB9 667 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PPANQ9NQ55 473 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 KMT5AQ9NQR1 393 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 CAPN7Q9Y6W3 813 aa11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
GTF3C2-206ENST00000454704 PSTPIP1O43586 416 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 LDHAP00338 332 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 ADRB2P07550 413 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 COL6A1P12109 1028 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 CLDN10P78369 228 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 CYP24A1Q07973 514 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 PTK6Q13882 451 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 RNF207Q6ZRF8 634 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 CPLX4Q7Z7G2 160 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 PALB2Q86YC2 1186 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 RELL1Q8IUW5 271 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 CCDC105Q8IYK2 499 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 TDHQ8IZJ6 230 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 RIBC1Q8N443 379 aaPredicted RBP11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 OR2W6PQ8NHA6 318 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 ZBTB9Q96C00 473 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 SEC16BQ96JE7 1060 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 IFT74Q96LB3 600 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 AGBL1Q96MI9 1066 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 EPB41L4BQ9H329 900 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 PXMP2Q9NR77 195 aa11.27□□□□□ -0.6
GTF3C2-206ENST00000454704 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms