RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 MED16Q9Y2X0 877 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 ZDHHC9Q9Y397 364 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 PCDHA1Q9Y5I3 950 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 SLC4A7Q9Y6M7 1214 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 ZMYM3Q14202 1370 aa4.6□□□□□ -1.67
HMGB1P15-201ENST00000453854 A0A1B0GTL3 188 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 PJA2O43164 708 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 SLC26A4O43511 780 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 FGF18O76093 207 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 IL18RAPO95256 599 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 FOSP01100 380 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 FGAP02671 866 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 CD1AP06126 327 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 SBK3P0C264 359 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 TRAPPC10P48553 1259 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 PIK3CGP48736 1102 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 GZMKP49863 264 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 APBA1Q02410 837 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 STK3Q13188 491 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 DAG1Q14118 895 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 KIF22Q14807 665 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 NFIXQ14938 502 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 KRBA2Q6ZNG9 492 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 KIF21AQ7Z4S6 1674 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 PCGF5Q86SE9 256 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 SKAP1Q86WV1 359 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 ADGRG2Q8IZP9 1017 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 VPS37AQ8NEZ2 397 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 FBXO18Q8NFZ0 1043 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 OR5M3Q8NGP4 307 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 NMD3Q96D46 503 aaKnown RBP4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 ADAM7Q9H2U9 754 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 IL23AQ9NPF7 189 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 RLIMQ9NVW2 624 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 CPNE7Q9UBL6 633 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 RGS17Q9UGC6 210 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 CPA4Q9UI42 421 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 OGDHLQ9ULD0 1010 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 PCDHA6Q9UN73 950 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 CORO2BQ9UQ03 480 aa4.59□□□□□ -1.67
HMGB1P15-201ENST00000453854 SMARCA2P51531 1590 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 MROH6A6NGR9 719 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 CXorf49A8MYA2 514 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 F8W8V4 182 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 GRM6O15303 877 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 HOXA3O43365 443 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 NCK2O43639 380 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 SLC43A1O75387 559 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 SASH1O94885 1247 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 AHSGP02765 367 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 MTHFD1P11586 935 aaKnown RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 HDCP19113 662 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 PTMSP20962 102 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 IL6STP40189 918 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 STT3AP46977 705 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 SUMO3P55854 103 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 HTRA4P83105 476 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 PTH1RQ03431 593 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 FOXD4Q12950 439 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 ATP2B3Q16720 1220 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 TMEM95Q3KNT9 176 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 CCDC93Q567U6 631 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 FAM209BQ5JX69 171 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 KRT40Q6A162 431 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 KBTBD2Q8IY47 623 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 MYOCQ99972 504 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 NDC1Q9BTX1 674 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 SMURF2Q9HAU4 748 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 ARFGAP3Q9NP61 516 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 CNNM1Q9NRU3 951 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 GPRC5BQ9NZH0 403 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 COL20A1Q9P218 1284 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 NR2E1Q9Y466 385 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 SNX13Q9Y5W8 968 aa4.58□□□□□ -1.68
HMGB1P15-201ENST00000453854 RIMBP3CA6NJZ7 1639 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 RIMBP3BA6NNM3 1639 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 RIMBP3Q9UFD9 1639 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 PNPLA7Q6ZV29 1317 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 A0A1W2PPC4 97 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 TRIM43BA6NCK2 446 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 POM121BA6NF01 834 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 B5MCH6 92 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 B4GALT3O60512 393 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 BRAFP15056 766 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 SLC6A4P31645 630 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 MAN1A1P33908 653 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 PPM1AP35813 382 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 NPEPPSP55786 919 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 SOX8P57073 446 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 RAPGEF1Q13905 1077 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 HIBCHQ6NVY1 386 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 GPRIN1Q7Z2K8 1008 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 PDSS2Q86YH6 399 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 GPATCH11Q8N954 259 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 SLC35B2Q8TB61 432 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 POF1BQ8WVV4 589 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 MAML1Q92585 1016 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 KIAA1191Q96A73 305 aa4.57□□□□□ -1.68
HMGB1P15-201ENST00000453854 TRIM43Q96BQ3 446 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms