RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 USP20Q9Y2K6 914 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 MYH1P12882 1939 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 MYH4Q9Y623 1939 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 LMNAP02545 664 aaKnown RBP14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 CETPP11597 493 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 SERPINB6P35237 376 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 WDR4P57081 412 aaKnown RBP14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 KIF22Q14807 665 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 C1orf146Q5VVC0 180 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 RNF43Q68DV7 783 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 UCMAQ8WVF2 138 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 POLR3CQ9BUI4 534 aaPredicted RBP14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 KMT5AQ9NQR1 393 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 ALAS1P13196 640 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 SSTR1P30872 391 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 STAT2P52630 851 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 LRRC23Q53EV4 343 aaPredicted RBP14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 CEP55Q53EZ4 464 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 PTF1AQ7RTS3 328 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 THTPAQ9BU02 230 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 TXLNGYQ9BZA5 131 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 DENND3A2RUS2 1198 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 C2orf71A6NGG8 1288 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 LPXNO60711 386 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 PECAM1P16284 738 aaPredicted RBP14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 RFX1P22670 979 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 PTPN4P29074 926 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 CACNA2D1P54289 1103 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 TMPRSS15P98073 1019 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 LMNB2Q03252 620 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 C3orf62Q6ZUJ4 267 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 DCAF4Q8WV16 495 aa14.66□□□□□ -0.06
UBE2D3-210ENST00000453744 CICQ96RK0 1608 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 CHRNB2P17787 502 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SERPINB3P29508 390 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 NR1H3Q13133 447 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 DMP1Q13316 513 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 FASTKD3Q14CZ7 662 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 PLA2G4FQ68DD2 849 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 ACAD10Q6JQN1 1059 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 RFWD3Q6PCD5 774 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 C1orf186Q6ZWK4 172 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 LRRC6Q86X45 466 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 CFAP36Q96G28 342 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SHCBP1LQ9BZQ2 653 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 PIDD1Q9HB75 910 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 FBXO6Q9NRD1 293 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 PI4KBQ9UBF8 816 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 POLLQ9UGP5 575 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 TCP10L2B9ZVM9 353 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SERPINB2P05120 415 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 ABL2P42684 1182 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SLC1A5Q15758 541 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 OGFOD1Q8N543 542 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 RBBP8NLQ8NC74 664 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 VTI1AQ96AJ9 217 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 UNC45AQ9H3U1 944 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 KIAA1586Q9HCI6 787 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 TUFT1Q9NNX1 390 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SMG5Q9UPR3 1016 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 NUP188Q5SRE5 1749 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 TPBGLP0DKB5 382 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 GZMAP12544 262 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 EIF2AK2P19525 551 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 SREBF1P36956 1147 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 FMO1Q01740 532 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 HIF1AQ16665 826 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 KHDC1Q4VXA5 237 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 ANO7Q6IWH7 933 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 CCDC110Q8TBZ0 833 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 ZNF75CPQ92670 426 aaPredicted RBP14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 FAM111AQ96PZ2 611 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 TMEM121Q9BTD3 319 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 CYP4F11Q9HBI6 524 aa14.65□□□□□ -0.06
UBE2D3-210ENST00000453744 ZWINTO95229 277 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 ATP6V1C1P21283 382 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PSMC4P43686 418 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 CSRNP1Q96S65 589 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 CALN1Q9BXU9 219 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 FHDC1Q9C0D6 1143 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 LRRC19Q9H756 370 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 MRPL47Q9HD33 250 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 NMRK1Q9NWW6 199 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 CHMP2BQ9UQN3 213 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PEX11AO75192 247 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 LIG4P49917 911 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 SOX10P56693 466 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 MGAT5Q09328 741 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 BSPRYQ5W0U4 402 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PPM1NQ8N819 430 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 CNKSR1Q969H4 720 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 NSL1Q96IY1 281 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PSMC3IPQ9P2W1 217 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 DNPEPQ9ULA0 475 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 PRR12Q9ULL5 1215 aa14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-210ENST00000453744 MAD1L1Q9Y6D9 718 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms